125 homologs were found in PanDaTox collection
for query gene Rxyl_1346 on replicon NC_008148
Organism: Rubrobacter xylanophilus DSM 9941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008148  Rxyl_1346  hypothetical protein  100 
 
 
364 aa  693    Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0806475  n/a   
 
 
-
 
NC_010725  Mpop_0138  cyclic nucleotide-binding protein  36.04 
 
 
382 aa  122  9.999999999999999e-27  Methylobacterium populi BJ001  Bacteria  normal  0.363055  normal  0.0562136 
 
 
-
 
NC_013730  Slin_2922  Acyl-CoA dehydrogenase type 2 domain protein  26.85 
 
 
391 aa  108  2e-22  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3329  acyl-CoA dehydrogenase type 2  32.83 
 
 
382 aa  107  3e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.684525  normal 
 
 
-
 
NC_011365  Gdia_0796  Acyl-CoA dehydrogenase-like protein  31.18 
 
 
381 aa  93.2  7e-18  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.585612  normal  0.628725 
 
 
-
 
NC_007778  RPB_4098  acyl-CoA dehydrogenase  28.87 
 
 
373 aa  86.7  7e-16  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.461592  normal  0.148654 
 
 
-
 
NC_007969  Pcryo_1801  putative acyl-CoA dehydrogenase-related protein  23.17 
 
 
362 aa  80.9  0.00000000000003  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.162926 
 
 
-
 
NC_011666  Msil_3593  acyl-CoA dehydrogenase domain protein  29.88 
 
 
385 aa  80.1  0.00000000000006  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007958  RPD_0575  Acyl-CoA dehydrogenase  27.61 
 
 
322 aa  78.6  0.0000000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5871  putative acyl-CoA dehydrogenase-related protein  29.53 
 
 
363 aa  77  0.0000000000004  Delftia acidovorans SPH-1  Bacteria  normal  0.845489  normal  0.406047 
 
 
-
 
NC_010623  Bphy_5416  putative acyl-CoA dehydrogenase-related protein  30.38 
 
 
388 aa  77  0.0000000000005  Burkholderia phymatum STM815  Bacteria  normal  normal  0.699876 
 
 
-
 
NC_011757  Mchl_4157  Acyl-CoA dehydrogenase type 2 domain  28.7 
 
 
391 aa  74.7  0.000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0737881  normal 
 
 
-
 
NC_010172  Mext_3848  acyl-CoA dehydrogenase type 2  29.22 
 
 
391 aa  73.9  0.000000000004  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.680066 
 
 
-
 
NC_004578  PSPTO_3131  hypothetical protein  27.03 
 
 
337 aa  73.6  0.000000000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.470644  n/a   
 
 
-
 
NC_010501  PputW619_2652  acyl-CoA dehydrogenase  25.58 
 
 
347 aa  73.2  0.000000000006  Pseudomonas putida W619  Bacteria  normal  0.530272  normal  0.685897 
 
 
-
 
NC_007005  Psyr_2998  hypothetical protein  27.76 
 
 
337 aa  72.4  0.00000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4305  Acyl-CoA dehydrogenase type 2 domain  28.05 
 
 
412 aa  70.9  0.00000000004  Methylobacterium populi BJ001  Bacteria  normal  0.0499711  normal 
 
 
-
 
NC_008541  Arth_0335  hypothetical protein  28.81 
 
 
341 aa  69.3  0.00000000009  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2543  hypothetical protein  25.83 
 
 
332 aa  67.8  0.0000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.730703 
 
 
-
 
NC_002947  PP_3259  acyl-CoA dehydrogenase-related protein  26.25 
 
 
347 aa  65.5  0.000000001  Pseudomonas putida KT2440  Bacteria  normal  0.543921  normal 
 
 
-
 
NC_009512  Pput_2502  hypothetical protein  26 
 
 
347 aa  64.7  0.000000002  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2027  putative acyl-CoA dehydrogenase-related protein  28.33 
 
 
335 aa  62.8  0.000000009  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2567  putative acyl-CoA dehydrogenase-related protein  28.44 
 
 
359 aa  62.8  0.000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752192  n/a   
 
 
-
 
NC_013441  Gbro_0202  hypothetical protein  26.4 
 
 
333 aa  62  0.00000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.499323  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0026  acyl-CoA dehydrogenase-family protein  30.17 
 
 
419 aa  57  0.0000004  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0129  acyl-CoA dehydrogenase  30.17 
 
 
419 aa  57  0.0000004  Burkholderia mallei SAVP1  Bacteria  normal  0.0377174  n/a   
 
 
-
 
NC_008835  BMA10229_0410  DszC family monooxygenase  30.17 
 
 
419 aa  57  0.0000004  Burkholderia mallei NCTC 10229  Bacteria  normal  0.993874  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1431  acyl-CoA dehydrogenase domain-containing protein  30.17 
 
 
419 aa  57  0.0000004  Burkholderia pseudomallei 1106a  Bacteria  normal  0.453095  n/a   
 
 
-
 
NC_009079  BMA10247_A1171  acyl-CoA dehydrogenase-family protein  30.17 
 
 
419 aa  57  0.0000004  Burkholderia mallei NCTC 10247  Bacteria  normal  0.350252  n/a   
 
 
-
 
NC_013510  Tcur_1377  acyl-CoA dehydrogenase domain protein  30.05 
 
 
409 aa  57.4  0.0000004  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0469267  n/a   
 
 
-
 
NC_008781  Pnap_0553  acyl-CoA dehydrogenase type 2  28.08 
 
 
413 aa  56.6  0.0000006  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A1517  Acyl-CoA dehydrogenases  30.17 
 
 
419 aa  56.6  0.0000006  Burkholderia pseudomallei 668  Bacteria  normal  0.0186344  n/a   
 
 
-
 
NC_010322  PputGB1_2636  acyl-CoA dehydrogenase  25.08 
 
 
347 aa  55.1  0.000002  Pseudomonas putida GB-1  Bacteria  normal  0.292935  normal  0.528602 
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  26.92 
 
 
380 aa  53.9  0.000005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4934  acyl-CoA dehydrogenase type 2  28.09 
 
 
403 aa  53.5  0.000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.236936  normal  0.753815 
 
 
-
 
NC_009380  Strop_4265  acyl-CoA dehydrogenase type 2  30.5 
 
 
387 aa  52.8  0.000008  Salinispora tropica CNB-440  Bacteria  normal  normal  0.184931 
 
 
-
 
NC_009953  Sare_4695  acyl-CoA dehydrogenase type 2  30.5 
 
 
387 aa  52.4  0.00001  Salinispora arenicola CNS-205  Bacteria  normal  0.46169  normal  0.258533 
 
 
-
 
NC_013061  Phep_0837  acyl-CoA dehydrogenase domain protein  24.93 
 
 
390 aa  52.4  0.00001  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1390  Acyl-CoA dehydrogenase type 2 domain protein  29.62 
 
 
384 aa  51.6  0.00002  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00428618  n/a   
 
 
-
 
NC_008025  Dgeo_1231  Acyl-CoA dehydrogenase, type 2-like protein  33.53 
 
 
384 aa  52  0.00002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.279686  normal 
 
 
-
 
NC_008726  Mvan_1361  acyl-CoA dehydrogenase domain-containing protein  26.46 
 
 
387 aa  52  0.00002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.237176  normal 
 
 
-
 
NC_008061  Bcen_3032  Acyl-CoA dehydrogenase, type 2-like  27.34 
 
 
403 aa  51.2  0.00003  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.210165  n/a   
 
 
-
 
NC_008543  Bcen2424_5334  acyl-CoA dehydrogenase type 2  27.34 
 
 
403 aa  51.2  0.00003  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0146  Acyl-CoA dehydrogenase type 2 domain-containing protein  29 
 
 
382 aa  51.2  0.00003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.658373 
 
 
-
 
NC_011886  Achl_0555  hypothetical protein  28.98 
 
 
350 aa  50.4  0.00004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  25.11 
 
 
376 aa  49.7  0.00008  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1932  acyl-CoA dehydrogenase domain-containing protein  22.49 
 
 
380 aa  49.7  0.00009  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1379  acyl-CoA dehydrogenase family protein  28.49 
 
 
419 aa  48.9  0.0001  Burkholderia thailandensis E264  Bacteria  normal  0.0461984  n/a   
 
 
-
 
NC_008025  Dgeo_0812  acyl-CoA dehydrogenase-like protein  26 
 
 
393 aa  49.3  0.0001  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1456  acyl-CoA dehydrogenase domain-containing protein  22.47 
 
 
398 aa  48.1  0.0002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0264  acyl-CoA dehydrogenase domain-containing protein  27.49 
 
 
394 aa  48.1  0.0002  Meiothermus ruber DSM 1279  Bacteria  normal  0.0644181  normal  0.99067 
 
 
-
 
NC_010681  Bphyt_2240  putative acyl-CoA dehydrogenase-related protein  26.33 
 
 
392 aa  48.1  0.0002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  28.43 
 
 
380 aa  47.8  0.0003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6339  acyl-CoA dehydrogenase type 2  28.57 
 
 
415 aa  47.8  0.0003  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008062  Bcen_6516  Acyl-CoA dehydrogenase, type 2-like  28.57 
 
 
423 aa  47  0.0005  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6750  acyl-CoA dehydrogenase type 2  28.57 
 
 
423 aa  47  0.0005  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.12749 
 
 
-
 
NC_007511  Bcep18194_B0314  Acyl-CoA dehydrogenase-like  26.34 
 
 
403 aa  47  0.0006  Burkholderia sp. 383  Bacteria  normal  0.733872  normal  0.907507 
 
 
-
 
NC_013131  Caci_1354  acyl-CoA dehydrogenase domain protein  28.02 
 
 
385 aa  47  0.0006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.70275 
 
 
-
 
NC_013947  Snas_3174  acyl-CoA dehydrogenase domain-containing protein  28.72 
 
 
383 aa  47  0.0006  Stackebrandtia nassauensis DSM 44728  Bacteria  hitchhiker  0.0000929019  hitchhiker  0.000000000938929 
 
 
-
 
NC_013131  Caci_0550  acyl-CoA dehydrogenase domain protein  24.93 
 
 
377 aa  46.6  0.0006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.193039  decreased coverage  0.00272664 
 
 
-
 
NC_012560  Avin_43640  Acyl-CoA dehydrogenase  29.56 
 
 
412 aa  47  0.0006  Azotobacter vinelandii DJ  Bacteria  normal  0.21996  n/a   
 
 
-
 
NC_013159  Svir_20400  acyl-CoA dehydrogenase  30.96 
 
 
396 aa  45.8  0.001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.170444  normal 
 
 
-
 
NC_009075  BURPS668_A1248  Acyl-CoA dehydrogenases  30.14 
 
 
438 aa  45.8  0.001  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3463  Acyl-CoA dehydrogenase type 2 domain  31.21 
 
 
400 aa  45.8  0.001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.844262  normal 
 
 
-
 
NC_010676  Bphyt_4541  Acyl-CoA dehydrogenase type 2 domain  24.67 
 
 
400 aa  45.8  0.001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.213669  normal 
 
 
-
 
NC_010682  Rpic_0695  Acyl-CoA dehydrogenase type 2 domain  23.68 
 
 
390 aa  45.4  0.001  Ralstonia pickettii 12J  Bacteria  normal  0.801723  normal  0.240956 
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  23.58 
 
 
381 aa  45.8  0.001  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_013171  Apre_0505  acyl-CoA dehydrogenase domain protein  22.95 
 
 
561 aa  45.1  0.002  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5185  acyl-CoA dehydrogenase family protein  26.9 
 
 
401 aa  45.4  0.002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  23.58 
 
 
376 aa  44.7  0.002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0721  acyl-CoA dehydrogenase domain-containing protein  29.67 
 
 
438 aa  45.4  0.002  Burkholderia mallei ATCC 23344  Bacteria  normal  0.130444  n/a   
 
 
-
 
NC_007005  Psyr_3604  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  28.97 
 
 
393 aa  44.7  0.002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.339437 
 
 
-
 
NC_007650  BTH_II2083  monoxygenase  27.35 
 
 
423 aa  45.4  0.002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_33630  acyl-CoA dehydrogenase  28.1 
 
 
386 aa  44.7  0.002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.732719 
 
 
-
 
NC_007964  Nham_2558  acyl-CoA dehydrogenase-like  28.12 
 
 
381 aa  45.1  0.002  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0268  butyryl-CoA dehydrogenase  21.36 
 
 
379 aa  45.1  0.002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0512  hypothetical protein  29.49 
 
 
338 aa  45.4  0.002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0189199  decreased coverage  0.000000311595 
 
 
-
 
NC_008835  BMA10229_0741  acyl-CoA dehydrogenase domain-containing protein  29.67 
 
 
438 aa  45.4  0.002  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1090  acyl-CoA dehydrogenase domain-containing protein  25.56 
 
 
388 aa  45.1  0.002  Mycobacterium sp. JLS  Bacteria  normal  0.992341  normal 
 
 
-
 
NC_009078  BURPS1106A_A1175  acyl-CoA dehydrogenase domain-containing protein  29.47 
 
 
438 aa  45.4  0.002  Burkholderia pseudomallei 1106a  Bacteria  normal  0.572617  n/a   
 
 
-
 
NC_009439  Pmen_4334  acyl-CoA dehydrogenase type 2  26.67 
 
 
409 aa  44.7  0.002  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5663  acyl-CoA dehydrogenase type 2  26.07 
 
 
407 aa  45.4  0.002  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3272  putative acyl-CoA dehydrogenase-related protein  28.62 
 
 
396 aa  45.1  0.002  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.00000123433  hitchhiker  0.0000576183 
 
 
-
 
NC_009921  Franean1_4050  acyl-CoA dehydrogenase domain-containing protein  30.82 
 
 
383 aa  45.1  0.002  Frankia sp. EAN1pec  Bacteria  normal  0.795074  normal  0.300284 
 
 
-
 
NC_010552  BamMC406_5213  acyl-CoA dehydrogenase type 2  26.59 
 
 
403 aa  44.7  0.002  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.174771 
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  23.58 
 
 
381 aa  45.1  0.002  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  23.58 
 
 
376 aa  44.7  0.002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_011885  Cyan7425_0063  Acyl-CoA dehydrogenase type 2 domain protein  21.98 
 
 
401 aa  45.1  0.002  Cyanothece sp. PCC 7425  Bacteria  n/a    normal 
 
 
-
 
NC_004578  PSPTO_2992  acyl-CoA dehydrogenase family protein  27.97 
 
 
412 aa  44.3  0.003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.270684  n/a   
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  23.58 
 
 
376 aa  44.7  0.003  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3451  acyl-CoA dehydrogenase domain protein  26 
 
 
377 aa  44.3  0.003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009338  Mflv_5011  acyl-CoA dehydrogenase domain-containing protein  25.98 
 
 
387 aa  44.7  0.003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.117513  normal  0.214057 
 
 
-
 
NC_009511  Swit_1013  acyl-CoA dehydrogenase domain-containing protein  25.27 
 
 
386 aa  44.7  0.003  Sphingomonas wittichii RW1  Bacteria  normal  0.960119  normal  0.0627799 
 
 
-
 
NC_013171  Apre_0081  acyl-CoA dehydrogenase domain protein  24 
 
 
642 aa  44.3  0.003  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  23.58 
 
 
381 aa  44.3  0.003  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7162  thermophilic desulfurizing enzyme  27.94 
 
 
408 aa  44.7  0.003  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1626  Acyl-CoA dehydrogenase type 2 domain protein  27.41 
 
 
387 aa  44.7  0.003  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1850  acyl-CoA dehydrogenase domain protein  27 
 
 
385 aa  44.7  0.003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.090649  n/a   
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  23.58 
 
 
376 aa  44.3  0.004  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2443  acyl-CoA dehydrogenase domain-containing protein  29.19 
 
 
438 aa  44.3  0.004  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
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