| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7162 |
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| Symbol | |
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| ID | 7380328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 130257 |
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| End bp | 131483 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641276 |
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| Product | thermophilic desulfurizing enzyme |
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| Protein accession | YP_002539573 |
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| Protein GI | 222102534 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAAA TTGATCTAGG CTGGGGCGAG GGCCCTTCAG AGCGCTATGA AAGCCTTGCC
GAAAAATTCC GCCCGATCTT CGCTGAAATT TCCACCGGTG CCATTGAACG CGAGCTCAAC
CGGACACTGC CCACCGAGCA AATCGCCAAG CTCAAGGCGG CTGGTTTCGC AGCCCTTCGG
GTGCCGGAAT CTGAAGGGGG TACAGGCGTA ACACTGCCTG AACTGTTCAA TCTGCTGATC
GAGCTGTCTG CTGCGGATTC CAATATCACC CAGGCGCTGC GCGGTCATGT TGGCTTTGCC
GAGGATGTGG TGAACAAGCT TGATGGCCCA GACCGCCGAC GCTGGACGGA ACGTCTGGTG
CGGGGCGACC TTGTTGGAAA CGCATGGACG GAAATTGGCA ACGCCCAACA GGCCAGCTTT
TCAACCACCG TATCCAAGCG GGATGGTCAA TTCGTCATCA ACGGCCAGAA ATATTACACA
ACAGGTTCGC TGTTTGCCGA CTGGATCAAT GTGGGTGTCA CCGGGCTTGA TGGTGCCAGC
AGCGCCGCGC AGGTCCGACG TGATGATCCG GGTGTCGAGG TTATTGATGA TTGGAATGGC
TTTGGCCAGA CATTGACGGC AAGTGGCACA ACGACATTCA CTGACGCCGC CGTTGATCCG
TTAGACATCG TTGCCGATGA CAATCAGTTT CGCTATGGCG CGGCTTTCTA CCAAACAGTT
CATCTCGCCA CGCTTGCGGG CATTGGCCGC GCCATTGCCG ACGAGACGGC TGCGGCCGTT
GCCAAACGGG TGCGAAACTA CTCCAACGCC GCAGGCCCGC GTTCCAGCCA AGACCCGCAG
GTGTTGCAGG TTGTCGGTCG CATCCGCAGC AATGCCTACA CGGCAACCGC AATTGTGTTG
CAGGTGGCAC GCGCCATCGA GAGGGCCTAT CAGGCCCATT TCAGCGGTGA TCGTGACGCC
GAAGATCGTG CCAATATCAT TGCAGAGCTG GAAACATCTC AAGCCCTGAC GGTGGTGACC
AACCTCATTC TTGAGGCCTC AACCATTATT TTCGATGCTC TTGGCGCATC GTCGACAAGC
AAACCCATTG GTCTTGATCG CCATTGGCGC AACGCCCGCA CTTTGTCCTC TCACAATCCC
CGGATCTACA AGGATCGCAT TGTCGGTGAT TTCGCCGTCA ATGGCACGCC TCCGCCATTT
CAATGGCGCA TTGGGCTTGC TGGGTGA
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| Protein sequence | MSQIDLGWGE GPSERYESLA EKFRPIFAEI STGAIERELN RTLPTEQIAK LKAAGFAALR
VPESEGGTGV TLPELFNLLI ELSAADSNIT QALRGHVGFA EDVVNKLDGP DRRRWTERLV
RGDLVGNAWT EIGNAQQASF STTVSKRDGQ FVINGQKYYT TGSLFADWIN VGVTGLDGAS
SAAQVRRDDP GVEVIDDWNG FGQTLTASGT TTFTDAAVDP LDIVADDNQF RYGAAFYQTV
HLATLAGIGR AIADETAAAV AKRVRNYSNA AGPRSSQDPQ VLQVVGRIRS NAYTATAIVL
QVARAIERAY QAHFSGDRDA EDRANIIAEL ETSQALTVVT NLILEASTII FDALGASSTS
KPIGLDRHWR NARTLSSHNP RIYKDRIVGD FAVNGTPPPF QWRIGLAG
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