| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3272 |
|---|
| Symbol | |
|---|
| ID | 8448886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3601957 |
|---|
| End bp | 3603147 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 645042351 |
|---|
| Product | putative acyl-CoA dehydrogenase-related protein |
|---|
| Protein accession | YP_003202592 |
|---|
| Protein GI | 258653436 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00000123433 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0000576183 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGACT CATCCCTCGC CCTTCGCCGA CCCAGCGCCG CCCACCGCCC GCCCGCCGCC
CGCCCGCCGC CCGTCCGGCC CCGTTTGGTG CGCGGCCGCG TCGGGCACTC GCCGGGCGTG
ACTGCGACCC CCCTCGCCGA GACCGCCGCC GCTGCGGCGG CCCGTCCCGA CGACCCCACG
CCCGGCGACC TCGTCGCGCT GGCCGCCGCG GTCGCCGGCG ACGCCGGCCG CGCGCTGGCC
CTGGCCCGGC AGGTCGGCCC CCGGCTTGCG GTGCCCGGCC GCGGGCGGAC GGCCCGGCGG
TGGGCCCTGC TGCGGGATCT GGCCGCGGCC GATCTGACTG CCGCCCGGGT GGCCGAGGCG
CACACCGACG CCCTGGCCAT CCTGGCCGAA GACCAGGCGG TCGGCGGCCG GACCAGCCTG
GACGCCGACC GGGCCGCCGC GCAGCTGTGG GGTGTCTTCG CCGCGGAGGG TCCCGGGGTG
CGGGTCGACG CCCAGCCGGC CGGCGACGGC TGGGTCCTGT CCGGCACCAA GCCGTGGTGC
TCGCTGGCCG ACCGGCTGGA CCGGGCGCTG ATCACCGCGC ACCTGCCCGG CGGCGGCCGC
CGCCTGTTCG CCATCGATCT GACCGGCCCG CACGTGCGGG TCGATCCACC GACCGGCTGG
TACGCCCGCG GGCTGGTGCA GGTGAGCTCG ACCGCGGTGC ACCTGGACCG CTGCCCGGCC
GAGCCGGTCG GGGCCGACGG CTGGTACCTG ACCCGGTCCG GGTTCGCCTG GGGCGGGATG
GGGGTGGCGG CCTGCTGGCT CGGCGGCGCC ATCGGCGTCG CCCGGGCCCT GCACCGCGCG
GTGCGCGCCC GCGAGCCGGA CCAGATCGGC CTGATGCACC TGGGCGCGAT CGATGCCGCG
CTGACCGCGG GTCAGCACCT GCTCGACGCG GCCGCGGCGG CCGTCGACGA CGGGCGGGCC
GACGGCCCGG CCGGCGCCCT GTGGGCGGCC CGGGTTCGCG CCGTGGTCGC CGGCACGGTC
GACACCGTGC TCACCCGGGT CGGGCACGCG CTCGGCCCGG CGCCGCTGGC GTTCGACGAC
GACCACGCCC GACGGGTCGC CGACCTGCAG CTGTACGTGC GCCAGCAGCA CGCCGAGCGG
GACGACGCGG CGCTCGGCGC GCTCGTCCGC GACCGCAAGG AATGGCCGTG A
|
|---|
| Protein sequence | MADSSLALRR PSAAHRPPAA RPPPVRPRLV RGRVGHSPGV TATPLAETAA AAAARPDDPT
PGDLVALAAA VAGDAGRALA LARQVGPRLA VPGRGRTARR WALLRDLAAA DLTAARVAEA
HTDALAILAE DQAVGGRTSL DADRAAAQLW GVFAAEGPGV RVDAQPAGDG WVLSGTKPWC
SLADRLDRAL ITAHLPGGGR RLFAIDLTGP HVRVDPPTGW YARGLVQVSS TAVHLDRCPA
EPVGADGWYL TRSGFAWGGM GVAACWLGGA IGVARALHRA VRAREPDQIG LMHLGAIDAA
LTAGQHLLDA AAAAVDDGRA DGPAGALWAA RVRAVVAGTV DTVLTRVGHA LGPAPLAFDD
DHARRVADLQ LYVRQQHAER DDAALGALVR DRKEWP
|
|---|
| |