| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2992 |
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| Symbol | |
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| ID | 1184648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3363774 |
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| End bp | 3365012 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394354 |
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| Product | acyl-CoA dehydrogenase family protein |
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| Protein accession | NP_792789 |
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| Protein GI | 28870170 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.270684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAC CAACCGGCTC TAACCCACTC TCGCTGGGCA CCGATTACGA AACCCTGGCC
AACCGCTTCC GGCCGATCTT CCGTGAGATC AGCGCGGGCA ACGTCGAACG TGAAAAAGCT
CGTGCCCTGC CCTACGAGCC TATTGAATGG CTGAAGAAAG CCGGTTTCGG CGCTGTGCGG
GTACCGAGCG AATATGGCGG TGCCGGTGCC TCGATCGGCC AGCTTTTTCA GCTGTTGATA
GAATTGGCCG AGGCCGACTC GAACATCCCG CAGGCTTTGC GGGCGCATTT TGCTTTTGTC
GAAGACCGCC TGAATGCGCC ACCGGGCGTG GACCGTGACA CATGGTTTGC ACGCTTTGTC
GCCGGGGATC TGGTCGGCAA TGGCTGGACC GAAGTCGGCA CGGTGAAAAT CGGTGATGTG
ATCACCAAGG TCAGTGCTCA GGGCGACGGT TTTGTGCTCA ACGGCACCAA GTTCTACAGC
ACCGGCAGCA TCTTCGCCGA CTGGATCGAC GTCTACGCCC AGCGTGCAGA CAATGGCGCC
GACGTGATTG CCGTGGTCAA TGCCCGGCAC GCTGGCGTGC GTCACAGCGA CGACTGGGAC
GGTTTCGGGC AGCGCACCAC CGGCAGCGGC ACGTCGGTGT ACGACAACGT GCCATTGCCG
GCGAACCATG TGATTCCCTT TGAAGAGCGC TTCAAGTATC AGACGGCGTT TTATCAACTG
GTGCTGCTGG CGGTGCTGGC CGGCATCGGC CGAGCCGTCG AGCGTGATAT CGCGCAAGAA
GTGCGTGACC GCAAACGTAT TTTCAGCCAC GGCAACGCGG GCAGCGTTAG CCAGGATTCG
CAGGTGCAGC AGGTGGTCGG GCAGATCGCC GCGCAAGTGT ACGCCGCCGA GGCAGCCACC
CTGCGTTCCG CCGAGCCGTT GCAGCGCGCT TACGTAGCGC GCTTCGGCAA TAACCCGCAG
CAGGAGAAAG ACGCCAATAT CGCGGCAGAA ATCGAAACCG CCAAGGCGCA GGTGATCGTC
TCGGAACTGG TGCTGCGTTC GGCCACCGAG CTGTTCAATG CGTTGGGCGC GTCGGGCGTG
AGCGTCAACA AGGCGCTGGA TCGCCACTGG CGCAATGCAC GCACAGCGGC ATCGCACAAT
CCGCTGATCT ACAAGGCGCG GATTGTTGGC GACTGGCGTA TCAATGGCAC CGAGCCGCCT
ATCGTCTGGC AGATCGGCAG CGGCACCGGT AAAGCCTGA
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| Protein sequence | MTQPTGSNPL SLGTDYETLA NRFRPIFREI SAGNVEREKA RALPYEPIEW LKKAGFGAVR
VPSEYGGAGA SIGQLFQLLI ELAEADSNIP QALRAHFAFV EDRLNAPPGV DRDTWFARFV
AGDLVGNGWT EVGTVKIGDV ITKVSAQGDG FVLNGTKFYS TGSIFADWID VYAQRADNGA
DVIAVVNARH AGVRHSDDWD GFGQRTTGSG TSVYDNVPLP ANHVIPFEER FKYQTAFYQL
VLLAVLAGIG RAVERDIAQE VRDRKRIFSH GNAGSVSQDS QVQQVVGQIA AQVYAAEAAT
LRSAEPLQRA YVARFGNNPQ QEKDANIAAE IETAKAQVIV SELVLRSATE LFNALGASGV
SVNKALDRHW RNARTAASHN PLIYKARIVG DWRINGTEPP IVWQIGSGTG KA
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