| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1431 |
|---|
| Symbol | |
|---|
| ID | 4904293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 1393467 |
|---|
| End bp | 1394726 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640144537 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001075465 |
|---|
| Protein GI | 126456421 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.453095 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCACG CCCCTGCCGA CCCGACGCGC TCGACCGGCG CCGATTATGC ATCGCTCGCC
GCCCGTTTCC GGCCGATCTT CGCGCGCATC GCCGAAGGCG CGATCGAGCG CGACCGCACG
CGCGCGCTGC CGCACGAACC GATTCGCTGG CTGAAGGAAG CCGGTTTCGG CGCGTTGCGC
GTGCCCGTGC ATGCGGGCGG CGCCGGCGCG TCGGTTCCTC AGCTCGTTCA ATTGCTGATC
GAGCTCGCGG CCGCGGATTC GAATCTGCCG CAGGCGCTGC GCGGCCATTT CGCCTTCGTC
GAGGACTGGC TGAATGCGCC GCCCGACGCC GCGCGGCGCG CGTGGTTCGA CCGCTTCGCG
AGCGGCCAGC TCGTCGGCAA CGCGTGGACG GAAGTGGGCG ACGTCGCGCT CGGCGAAGTG
CGCACGAAGG TGGCGAAACG CGACGGCGGC TGGGTGGTGA ACGGCGAGAA GTACTACAGC
ACCGGAGCGA TCTTCGCGGA CTGGATCGAC GTCTACGCGC AGCGCACGGA CGACGGCGGC
CCGGTGATCG CCGCGGTCGC GGCGCGCCAG GACGGCGTGA TCCTCGGCGA CGACTGGGAC
GGCTTCGGCC AGGCGACGAC GGGCAGCGGC ACGACGCGCT TCGTCGACGC GCACGTCGAC
GAAGCGAACG TCATCGATTT CGCGCGCCGC TTCAAATATC AGACCGCGTT CTACCAGTTG
TTCCATCTCG CGACGCTCGC CGGCATCGGC CGCGCGGTCG AGCGCGACGC GAGCGCGCTC
GTGCGCGGGC GCCGCCGGGT CTACAGCCAC GGCAACGCGC CGCGCGTGAG CGACGACGCA
CAGATCCTGC AGGTCGTCGG CGAGATCTCG GCATGGGCGT ATGCGGCCGA GGCGATCGCG
CTGCGCGCCG CGCAGCCGTC GCAGCGCGCG TACGAAGCGC GCGTCGGCGG CGACGCGGCC
GCCGAGCACG ACGCGAACGT CGCGGCCGAA ATCGAATCGG CGCAGGGGCA ACTGGTGGTG
TCGGAGCTCG TGCTGCGCGC GGCGACGCAT CTGTTCGACG CGCTCGGCGC GTCGGCGACG
CGCGCGACGA ACGCGCTCGA CCGTCACTGG CGCAACGCGC GCACGGTCGC ATCGCATAAT
CCGCTCGTCT ACAAGGCGAG GATCGTCGGG GATCGTGCGG TCAACGGAAC GGAGCCGCCC
TACGTCTGGC AGATCGGCGC CGGGCCCGGC GGGCCACGCG AACCGGAACA GGCGGCGTGA
|
|---|
| Protein sequence | MSHAPADPTR STGADYASLA ARFRPIFARI AEGAIERDRT RALPHEPIRW LKEAGFGALR
VPVHAGGAGA SVPQLVQLLI ELAAADSNLP QALRGHFAFV EDWLNAPPDA ARRAWFDRFA
SGQLVGNAWT EVGDVALGEV RTKVAKRDGG WVVNGEKYYS TGAIFADWID VYAQRTDDGG
PVIAAVAARQ DGVILGDDWD GFGQATTGSG TTRFVDAHVD EANVIDFARR FKYQTAFYQL
FHLATLAGIG RAVERDASAL VRGRRRVYSH GNAPRVSDDA QILQVVGEIS AWAYAAEAIA
LRAAQPSQRA YEARVGGDAA AEHDANVAAE IESAQGQLVV SELVLRAATH LFDALGASAT
RATNALDRHW RNARTVASHN PLVYKARIVG DRAVNGTEPP YVWQIGAGPG GPREPEQAA
|
|---|
| |