| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0146 |
|---|
| Symbol | |
|---|
| ID | 8881323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 148954 |
|---|
| End bp | 150102 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Acyl-CoA dehydrogenase type 2 domain-containing protein |
|---|
| Protein accession | YP_003508959 |
|---|
| Protein GI | 291297681 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.658373 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACGG TTCGGCGCAT GGTCGCCGGG ATGCGTGACC GCGCCCGCGT TCACGACGAG
GAGGGCTCGT TCCCGGCGGA GGACTTCCGG CAGCTGCGGC AGCGCGGCCT GATGGGTCTC
ATGGTGCCCA AGGAACTCGG CGGCCGCGGC GCGTCGTTCA GTGAATACGT CGAGGTCGCC
TTCCAGCTGG GACGGGGCAA CGGCGCCACC GGGCTGGTGT TCAACATGCA CGCCAGCGTC
ACCGGGGCCC TGGCCCAGAC CCCCAAGGAA CTGGCCGAGG AACTGGGCGC GGGCGCCGAG
TTCTTCGCGC AGCGCGAGGA GGTGCTGGCC GCCGCCGCGT CCGGCAGCCT GTACTCGGTG
GCGATGAGCG AACGCGGCTC CGGCTCCCGG CTGTCCAAGA TGTCCACGAC CTATGTCCCC
GAGGGCGACG GTTTCCGCGT CACGGGACTG AAGTCCTTCG TCTCGGGCGC CGGCAACGCC
GACGCCTACC TGGTGGCCGC CAAACACGCC GACAAACCCG ACGTCATCTC GCAGTTCCTG
GTTCCGGCCG GTGAGGGCGT CACGATCGAC CCGGTGTGGG ACACGATGGG CATGCGCGCC
ACCACCAGCC ACGACCTGCG GCTGGACGTG CACGTGCCCG CCGCGCGACT GCTGGGCGGC
GTCGAGGGCG TCACTCTGCT GGCCGCACAG CTCGCACCAC ACTGGATGGT CGCCAGCTAC
GCCGCGGTCT ACGTCGGCGT CGCCCGGGCC GCCGTCGACC TGGCCGCCAA GCAGATCAAC
GAACGAAAAC TGTCCGATGT GGCCTCGGTA CGGGCCAGGC TCGGCCGGGC CGACGCGGCC
GTCGCCGCCG CCTGGGCCAC CGTCGCCGAG GCCGCCCGCC GCGTCGACGC GGGCGATCCA
CAGGCCCCGA CCTGGGTCTG GCGGGCCAAA CTGCTGGCCG GAGACACCGC CGCCGAGGTG
ACGGCGTCCA TGATGGAAGC CTGCGGGGCG TCGTCGATCC GGCGCGGCAA CCCGCTGGAG
CGGCTGTTCC GCGACGCCCG CTGCGGCGCG ATGCAACCGG CGACCTCCGA CGTGTGCGCC
GACTGGCTCG CCGTCGCGGC GCTGGGCGGT GACCCCTACG CCGACACCGT GGCCGGACCA
CGATGGTGA
|
|---|
| Protein sequence | MLTVRRMVAG MRDRARVHDE EGSFPAEDFR QLRQRGLMGL MVPKELGGRG ASFSEYVEVA
FQLGRGNGAT GLVFNMHASV TGALAQTPKE LAEELGAGAE FFAQREEVLA AAASGSLYSV
AMSERGSGSR LSKMSTTYVP EGDGFRVTGL KSFVSGAGNA DAYLVAAKHA DKPDVISQFL
VPAGEGVTID PVWDTMGMRA TTSHDLRLDV HVPAARLLGG VEGVTLLAAQ LAPHWMVASY
AAVYVGVARA AVDLAAKQIN ERKLSDVASV RARLGRADAA VAAAWATVAE AARRVDAGDP
QAPTWVWRAK LLAGDTAAEV TASMMEACGA SSIRRGNPLE RLFRDARCGA MQPATSDVCA
DWLAVAALGG DPYADTVAGP RW
|
|---|
| |