| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5334 |
|---|
| Symbol | |
|---|
| ID | 4453731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 2423019 |
|---|
| End bp | 2424230 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639697395 |
|---|
| Product | acyl-CoA dehydrogenase type 2 |
|---|
| Protein accession | YP_838960 |
|---|
| Protein GI | 116693427 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATC CCCGCGGCCC GGCGACGCTG GCGCCGGATA CCGATGCACC GGCCGTCGAC
CGCGCGGCGC TGGCGCGCGC GATCGACGCG CTGCGCGTGA GCGCCGCCGA GCGCGACCGC
GCGGGCGGTC ATGCCGCCCG GGAGAAGCAG TGGCTCGCCG ACGCGGGTTT GCTGACGCTC
GCGGTGCCGC GCGCGTTCGG CGGGCAGGAA GCGGCGTGGC CCGAGATTTA CGACGCGATC
CGGCAGGTCG CGCGGGTCGA CAGCGCGCTC GCGCATCTCG TCGGCTTCCA GTGCCTGCAG
GTGGTGAGCG TCGACGTGTG GGGCAACGCC GCGCAGCGCG AACGCTACCT GCGCGGCACG
GTCGACCGGC GCTGGTGGTG GGGCAACGCG GTCAATCCGC TCGACACGCG GCTCGTCGCC
ACGGCGACGC CCGACGGCGG CTACCGGCTC GACGGCGTGA AGGGCTTCTG TTCCGGCACG
CGCGGCTCGC AGCGGATGAC GGTATCCGCG CACGATCCGG CCATCGGCCG CACCGTGTTC
GGCGTGGTGC CGACCGATCG GGCCGGGATC ACCGTCAACG ACGACTGGGA CCCGGTCGGC
CAGCGCCAGA CCGACAGCGG TAGCGTGCGC TTCGACGGCG TGACGCTTGC GCCGGACGAG
GTGCTGCACC GGTCGGAAGC GCCGCCGACG CCGCGCGCGA CGCTGCGCAC GCTGGTGTCG
CAGCTCGTGC TGACGAACCT GTTCGTCGGC CTGGCGGAAG GCGCGCTGGC GGAGGCGCGC
GACTACGTGC GGCAGCACGG CCGCCCGTGG ATTCATTCGG ACGTCGAGCG GGCCGAAGAC
GATCCGTACA CGTTGCAGCG CTTCGGCGAC ATGCGCGTGC GCGCGATCGC CGCGGCGGCG
CTGGCCGATC GCGCGGCCAA CACGTTGCAG CACGCATGGG CGCGGCAGGA CGCGCTGACG
GCCGACGAAC GCGCCGAAGT CGCGCTCGCG GTGTCGGAAG CGAAGATCGT CGCGCAGCGC
GCGGCGCTGG ATAACGGCGA AGCGCTGTTC GATGCGTGTG GCGCGCGCGC GACGGCCGCG
TCGCTCGGCC TCGACCGTTT CTGGCGGAAC GCGCGCACGC ATACGCTGCA CGATCCGCTC
GACTATCGGC TGCGCGACGT GGGCCGATAT GCGCTGACGG GTGAGTTGCC GCCGGCGTCG
CTCTATACGT AA
|
|---|
| Protein sequence | MNDPRGPATL APDTDAPAVD RAALARAIDA LRVSAAERDR AGGHAAREKQ WLADAGLLTL
AVPRAFGGQE AAWPEIYDAI RQVARVDSAL AHLVGFQCLQ VVSVDVWGNA AQRERYLRGT
VDRRWWWGNA VNPLDTRLVA TATPDGGYRL DGVKGFCSGT RGSQRMTVSA HDPAIGRTVF
GVVPTDRAGI TVNDDWDPVG QRQTDSGSVR FDGVTLAPDE VLHRSEAPPT PRATLRTLVS
QLVLTNLFVG LAEGALAEAR DYVRQHGRPW IHSDVERAED DPYTLQRFGD MRVRAIAAAA
LADRAANTLQ HAWARQDALT ADERAEVALA VSEAKIVAQR AALDNGEALF DACGARATAA
SLGLDRFWRN ARTHTLHDPL DYRLRDVGRY ALTGELPPAS LYT
|
|---|
| |