More than 300 homologs were found in PanDaTox collection
for query gene Mpop_0138 on replicon NC_010725
Organism: Methylobacterium populi BJ001



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010725  Mpop_0138  cyclic nucleotide-binding protein  100 
 
 
382 aa  730    Methylobacterium populi BJ001  Bacteria  normal  0.363055  normal  0.0562136 
 
 
-
 
NC_010505  Mrad2831_3329  acyl-CoA dehydrogenase type 2  76.3 
 
 
382 aa  533  1e-150  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.684525  normal 
 
 
-
 
NC_011666  Msil_3593  acyl-CoA dehydrogenase domain protein  56.32 
 
 
385 aa  352  8e-96  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010725  Mpop_4305  Acyl-CoA dehydrogenase type 2 domain  61.58 
 
 
412 aa  345  7e-94  Methylobacterium populi BJ001  Bacteria  normal  0.0499711  normal 
 
 
-
 
NC_010172  Mext_3848  acyl-CoA dehydrogenase type 2  57.26 
 
 
391 aa  343  2e-93  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.680066 
 
 
-
 
NC_011757  Mchl_4157  Acyl-CoA dehydrogenase type 2 domain  56.73 
 
 
391 aa  343  2.9999999999999997e-93  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0737881  normal 
 
 
-
 
NC_007778  RPB_4098  acyl-CoA dehydrogenase  42.78 
 
 
373 aa  269  5.9999999999999995e-71  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.461592  normal  0.148654 
 
 
-
 
NC_011365  Gdia_0796  Acyl-CoA dehydrogenase-like protein  46.29 
 
 
381 aa  256  3e-67  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.585612  normal  0.628725 
 
 
-
 
NC_013730  Slin_2922  Acyl-CoA dehydrogenase type 2 domain protein  40.83 
 
 
391 aa  250  3e-65  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0575  Acyl-CoA dehydrogenase  41.98 
 
 
322 aa  247  2e-64  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1346  hypothetical protein  36.31 
 
 
364 aa  113  5e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0806475  n/a   
 
 
-
 
NC_010002  Daci_5871  putative acyl-CoA dehydrogenase-related protein  32.99 
 
 
363 aa  104  3e-21  Delftia acidovorans SPH-1  Bacteria  normal  0.845489  normal  0.406047 
 
 
-
 
NC_002947  PP_3259  acyl-CoA dehydrogenase-related protein  30.79 
 
 
347 aa  99.4  1e-19  Pseudomonas putida KT2440  Bacteria  normal  0.543921  normal 
 
 
-
 
NC_007005  Psyr_2998  hypothetical protein  31.58 
 
 
337 aa  99.4  1e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3131  hypothetical protein  30.88 
 
 
337 aa  98.2  2e-19  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.470644  n/a   
 
 
-
 
NC_009512  Pput_2502  hypothetical protein  29.9 
 
 
347 aa  95.9  1e-18  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2652  acyl-CoA dehydrogenase  30.84 
 
 
347 aa  95.5  2e-18  Pseudomonas putida W619  Bacteria  normal  0.530272  normal  0.685897 
 
 
-
 
NC_007492  Pfl01_2543  hypothetical protein  31.53 
 
 
332 aa  94.4  3e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.730703 
 
 
-
 
NC_010322  PputGB1_2636  acyl-CoA dehydrogenase  30.77 
 
 
347 aa  93.2  6e-18  Pseudomonas putida GB-1  Bacteria  normal  0.292935  normal  0.528602 
 
 
-
 
NC_010623  Bphy_5416  putative acyl-CoA dehydrogenase-related protein  32.2 
 
 
388 aa  90.1  6e-17  Burkholderia phymatum STM815  Bacteria  normal  normal  0.699876 
 
 
-
 
NC_010681  Bphyt_2240  putative acyl-CoA dehydrogenase-related protein  33.67 
 
 
392 aa  89  1e-16  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2027  putative acyl-CoA dehydrogenase-related protein  32.12 
 
 
335 aa  88.6  2e-16  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5156  acyl-CoA dehydrogenase  25.28 
 
 
420 aa  85.5  0.000000000000001  Agrobacterium vitis S4  Bacteria  normal  0.0718281  n/a   
 
 
-
 
NC_012560  Avin_31490  Acyl-CoA dehydrogenase family protein  28.43 
 
 
402 aa  85.9  0.000000000000001  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_1801  putative acyl-CoA dehydrogenase-related protein  26.23 
 
 
362 aa  84.3  0.000000000000003  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.162926 
 
 
-
 
NC_013510  Tcur_1377  acyl-CoA dehydrogenase domain protein  31.43 
 
 
409 aa  83.2  0.000000000000008  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0469267  n/a   
 
 
-
 
NC_008463  PA14_34300  DszC family monooxygenase  30 
 
 
405 aa  82  0.00000000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.803163  normal  0.0145718 
 
 
-
 
NC_009656  PSPA7_2915  hypothetical protein  26.8 
 
 
405 aa  82  0.00000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.281087  n/a   
 
 
-
 
NC_009439  Pmen_2037  acyl-CoA dehydrogenase domain-containing protein  27.81 
 
 
375 aa  81.3  0.00000000000002  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.666233 
 
 
-
 
NC_011885  Cyan7425_0063  Acyl-CoA dehydrogenase type 2 domain protein  24.68 
 
 
401 aa  80.5  0.00000000000004  Cyanothece sp. PCC 7425  Bacteria  n/a    normal 
 
 
-
 
NC_009953  Sare_4695  acyl-CoA dehydrogenase type 2  32.21 
 
 
387 aa  78.6  0.0000000000002  Salinispora arenicola CNS-205  Bacteria  normal  0.46169  normal  0.258533 
 
 
-
 
NC_009620  Smed_4516  acyl-CoA dehydrogenase type 2  27.09 
 
 
395 aa  77  0.0000000000005  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.130533 
 
 
-
 
NC_007492  Pfl01_0239  Acyl-CoA dehydrogenase-like  29.53 
 
 
397 aa  76.6  0.0000000000007  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0353  Acyl-CoA dehydrogenase, C-terminal  28.17 
 
 
401 aa  75.5  0.000000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.758482 
 
 
-
 
NC_009380  Strop_4265  acyl-CoA dehydrogenase type 2  32.21 
 
 
387 aa  75.9  0.000000000001  Salinispora tropica CNB-440  Bacteria  normal  normal  0.184931 
 
 
-
 
NC_007952  Bxe_B1545  hypothetical protein  30.4 
 
 
416 aa  74.7  0.000000000002  Burkholderia xenovorans LB400  Bacteria  normal  0.828601  normal  0.5845 
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  26.36 
 
 
377 aa  75.1  0.000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_008726  Mvan_1361  acyl-CoA dehydrogenase domain-containing protein  29.1 
 
 
387 aa  74.3  0.000000000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.237176  normal 
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  25.65 
 
 
380 aa  73.9  0.000000000004  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4989  acyl-CoA dehydrogenase type 2  28.64 
 
 
393 aa  73.6  0.000000000005  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0238  acyl-CoA dehydrogenase type 2  27.01 
 
 
393 aa  72.8  0.000000000009  Pseudomonas putida F1  Bacteria  normal  0.679999  normal  0.247147 
 
 
-
 
NC_002947  PP_0223  DszC family monooxygenase  27.01 
 
 
406 aa  72.8  0.00000000001  Pseudomonas putida KT2440  Bacteria  decreased coverage  0.00885592  hitchhiker  0.00679283 
 
 
-
 
NC_007492  Pfl01_3917  Acyl-CoA dehydrogenase-like  27.25 
 
 
395 aa  72.4  0.00000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0247  acyl-CoA dehydrogenase type 2  26.42 
 
 
393 aa  71.6  0.00000000002  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2567  putative acyl-CoA dehydrogenase-related protein  32.14 
 
 
359 aa  71.6  0.00000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752192  n/a   
 
 
-
 
NC_009656  PSPA7_2684  putative acyl-CoA dehydrogenase  27.73 
 
 
375 aa  72  0.00000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.126402  n/a   
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  25.22 
 
 
380 aa  72  0.00000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_31540  putative acyl-CoA dehydrogenase  27.73 
 
 
375 aa  71.6  0.00000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.430124  hitchhiker  0.000095284 
 
 
-
 
NC_009428  Rsph17025_1335  acyl-CoA dehydrogenase domain-containing protein  30.08 
 
 
379 aa  70.5  0.00000000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.254429  normal  0.854455 
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  25.14 
 
 
379 aa  70.1  0.00000000005  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
NC_013441  Gbro_0202  hypothetical protein  28.82 
 
 
333 aa  69.7  0.00000000007  Gordonia bronchialis DSM 43247  Bacteria  normal  0.499323  n/a   
 
 
-
 
NC_007509  Bcep18194_C7715  Acyl-CoA dehydrogenase-like  27.3 
 
 
448 aa  68.9  0.0000000001  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3157  acyl-CoA dehydrogenase type 2  26.74 
 
 
407 aa  69.3  0.0000000001  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0335  hypothetical protein  34.85 
 
 
341 aa  68.9  0.0000000001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1523  acyl-CoA dehydrogenase domain-containing protein  25.94 
 
 
412 aa  68.6  0.0000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0928  acyl-CoA dehydrogenase domain-containing protein  25.94 
 
 
412 aa  68.2  0.0000000002  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0398526  n/a   
 
 
-
 
NC_009075  BURPS668_A1013  acyl-CoA dehydrogenase domain-containing protein  25.94 
 
 
412 aa  68.6  0.0000000002  Burkholderia pseudomallei 668  Bacteria  normal  0.153934  n/a   
 
 
-
 
NC_006349  BMAA1148  acyl-CoA dehydrogenase domain-containing protein  25.94 
 
 
412 aa  68.6  0.0000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0091  acyl-CoA dehydrogenase domain-containing protein  25.94 
 
 
412 aa  68.6  0.0000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2254  acyl-CoA dehydrogenase domain-containing protein  25.94 
 
 
451 aa  68.2  0.0000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2867  Acyl-CoA dehydrogenase-like  26.45 
 
 
375 aa  68.6  0.0000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.967944  normal  0.115681 
 
 
-
 
NC_008254  Meso_0589  acyl-CoA dehydrogenase-like  27.56 
 
 
380 aa  68.6  0.0000000002  Chelativorans sp. BNC1  Bacteria  normal  0.371996  n/a   
 
 
-
 
NC_004578  PSPTO_5185  acyl-CoA dehydrogenase family protein  26.76 
 
 
401 aa  67.8  0.0000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4988  acyl-CoA dehydrogenase type 2  28.44 
 
 
413 aa  67.8  0.0000000003  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3567  acyl-CoA dehydrogenase domain-containing protein  25.73 
 
 
382 aa  67.8  0.0000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_5011  acyl-CoA dehydrogenase domain-containing protein  27.71 
 
 
387 aa  67.4  0.0000000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.117513  normal  0.214057 
 
 
-
 
NC_009077  Mjls_1090  acyl-CoA dehydrogenase domain-containing protein  26.74 
 
 
388 aa  67  0.0000000005  Mycobacterium sp. JLS  Bacteria  normal  0.992341  normal 
 
 
-
 
NC_009512  Pput_0239  acyl-CoA dehydrogenase type 2  26.23 
 
 
413 aa  67  0.0000000005  Pseudomonas putida F1  Bacteria  normal  normal  0.238794 
 
 
-
 
NC_004578  PSPTO_2440  acyl-CoA dehydrogenase family protein  25.91 
 
 
395 aa  66.6  0.0000000007  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0806323  n/a   
 
 
-
 
NC_009439  Pmen_2362  acyl-CoA dehydrogenase type 2  27.1 
 
 
399 aa  66.6  0.0000000007  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00266653  hitchhiker  0.00112869 
 
 
-
 
NC_008781  Pnap_0557  acyl-CoA dehydrogenase type 2  26.55 
 
 
395 aa  66.6  0.0000000007  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.692519  normal 
 
 
-
 
NC_013202  Hmuk_3108  acyl-CoA dehydrogenase domain protein  27.07 
 
 
380 aa  66.6  0.0000000007  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_008705  Mkms_1079  acyl-CoA dehydrogenase domain-containing protein  26.74 
 
 
388 aa  66.6  0.0000000007  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0773066 
 
 
-
 
NC_008146  Mmcs_1063  acyl-CoA dehydrogenase-like protein  26.74 
 
 
388 aa  66.6  0.0000000007  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0248  acyl-CoA dehydrogenase type 2  25.9 
 
 
413 aa  65.9  0.000000001  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_08210  butyryl-CoA dehydrogenase  24.45 
 
 
394 aa  65.5  0.000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.249284 
 
 
-
 
NC_008062  Bcen_6515  Acyl-CoA dehydrogenase, type 2-like  26.29 
 
 
412 aa  65.9  0.000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6749  acyl-CoA dehydrogenase type 2  26.29 
 
 
412 aa  65.9  0.000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.144379 
 
 
-
 
NC_013172  Bfae_11010  acyl-CoA dehydrogenase  28.61 
 
 
399 aa  65.1  0.000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_0156  Acyl-CoA dehydrogenase  28.57 
 
 
379 aa  65.1  0.000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1779  acyl-CoA dehydrogenase type 2  27.19 
 
 
430 aa  64.7  0.000000002  Delftia acidovorans SPH-1  Bacteria  normal  0.392008  normal 
 
 
-
 
NC_007511  Bcep18194_B0714  Acyl-CoA dehydrogenase  27.11 
 
 
377 aa  65.1  0.000000002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1742  acyl-CoA dehydrogenase domain-containing protein  27.27 
 
 
412 aa  65.1  0.000000002  Burkholderia thailandensis E264  Bacteria  normal  0.469598  n/a   
 
 
-
 
NC_010515  Bcenmc03_5323  acyl-CoA dehydrogenase domain-containing protein  27.62 
 
 
377 aa  64.7  0.000000002  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.00118834  normal  0.0149252 
 
 
-
 
NC_013205  Aaci_0955  Acyl-CoA dehydrogenase type 2 domain protein  26.45 
 
 
398 aa  65.1  0.000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6338  acyl-CoA dehydrogenase type 2  26.29 
 
 
412 aa  65.1  0.000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3055  acyl-CoA dehydrogenase domain-containing protein  25.71 
 
 
379 aa  65.1  0.000000002  Caulobacter sp. K31  Bacteria  normal  0.350853  normal 
 
 
-
 
NC_014158  Tpau_1370  Acyl-CoA dehydrogenase type 2 domain protein  28.17 
 
 
395 aa  65.5  0.000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2355  acyl-CoA dehydrogenase domain-containing protein  23.98 
 
 
381 aa  64.7  0.000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.774843  n/a   
 
 
-
 
NC_010322  PputGB1_2163  acyl-CoA dehydrogenase type 2  25.14 
 
 
395 aa  63.9  0.000000004  Pseudomonas putida GB-1  Bacteria  normal  0.893753  normal  0.219871 
 
 
-
 
NC_002947  PP_0224  DszC family monooxygenase  25.57 
 
 
413 aa  63.9  0.000000005  Pseudomonas putida KT2440  Bacteria  normal  0.88641  hitchhiker  0.00688358 
 
 
-
 
NC_009720  Xaut_1128  acyl-CoA dehydrogenase type 2  35.05 
 
 
404 aa  63.5  0.000000005  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3404  acyl-CoA dehydrogenase-like  27.33 
 
 
377 aa  63.9  0.000000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4963  acyl-CoA dehydrogenase domain-containing protein  27.33 
 
 
377 aa  63.9  0.000000005  Burkholderia cenocepacia HI2424  Bacteria  normal  0.398605  normal  0.378723 
 
 
-
 
NC_002947  PP_2216  acyl-CoA dehydrogenase domain-containing protein  26.18 
 
 
375 aa  63.5  0.000000006  Pseudomonas putida KT2440  Bacteria  normal  0.585123  normal 
 
 
-
 
NC_002947  PP_2755  hypothetical protein  26.73 
 
 
414 aa  63.5  0.000000006  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3069  acyl-CoA dehydrogenase domain protein  25.88 
 
 
387 aa  63.5  0.000000006  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.117634  n/a   
 
 
-
 
NC_009512  Pput_3522  acyl-CoA dehydrogenase domain-containing protein  26.47 
 
 
375 aa  63.5  0.000000006  Pseudomonas putida F1  Bacteria  normal  normal  0.0559083 
 
 
-
 
NC_009049  Rsph17029_1789  acyl-CoA dehydrogenase domain-containing protein  28.57 
 
 
379 aa  63.5  0.000000006  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0858072  normal 
 
 
-
 
NC_008781  Pnap_0459  acyl-CoA dehydrogenase domain-containing protein  26.9 
 
 
376 aa  63.2  0.000000007  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
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