Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0247 |
Symbol | |
ID | 5867944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 288691 |
End bp | 289872 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641545327 |
Product | acyl-CoA dehydrogenase type 2 |
Protein accession | YP_001666496 |
Protein GI | 167031265 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTACAA ATATCATTAC CAGCGACACC GAAGCCCTGA ATGTTGCCGA AGACATCGCC CAGCAACTGC GCCGCGACAG CGCCCTGCGC GACCGCGAGC GCCGCTTGCC GCACGCCGAA CTGGAGCTGT TCACCCGCTC CGGCCTATGG GCCATCAGCG TGCCCAAGGC CTTCGGTGGC GCCGGCGTGT CCAATGTCAC CCTGGCCAAG GTCATCGCCC GTATCGCCCA AGCCGACGGC TCGCTCGGGC AGATCCCGCA AAACCATTTC TACGGCCTGG AAGTACTGCG AGTAAACGGC ACCCCCGAGC AGCAACAGCG GCTATACGCC GAAGTGTTGG CCGGCCGCCG CTTTGGCAAT GCCCTGGCCG AGTTGGGCAC CAAGACCGCC AACGAACGCA CCACCCGACT GAGCCGTGAC GGCGATGGCT TCCGCATCAA CGGCCGCAAG TTCTATTCCA CCGGTGCCAT CTACGCCCAG CGCATTCCCA CCTCGGTCGT CGACGACCAA GGCGTGCAGC AACTGGCCTT CGTCCCAGCC GACAGCCAGG GCTTGCAAGT GATCGATGAC TGGAGCGGAT TCGGCCAGCG CACCACCGGC AGCGGTTCGG TGGTGTTCGA CAACGTGTAC GTCAGCGCCG CCGACGTGGT GCCGTTCCAG AGTGCCTTCG AGCGCCCTAC CCCGGTCGGG CCGTTGGCGC AGATCCTTCA TGCCGCAATC GACACCGGCA TCGCCCGCGC GGCTTATGAA GATGCCCTGC ACTTCGTACG TACCCGCAGT CGTCCGTGGG TCGACTCCGG CCTGGACAAG GCCACGGATG ACCCGCTGAC GTTGAAAAGC TTCGGCCACC TGGCGATCCG TTTGCACGCC GCCGAGGCCC TGCTGGAGCG CGCCGGTGAA TACCTCGACC GCGCCCGCGA CGACAGCACC GCCGACAACG TGGCCGCCGC CTCCATCGCC GTAGCCGAAG CACGGGCCAT CAGCACCGAG ATTTCCCTCG CCGCCGGCAC CGCGCTGTTC GAACTGGGCG GCAGCCAAGC CACCCTGGCC GAGCACAACC TCGACCGCCA CTGGCGCAAC GCCCGTGTGC ACACCCTGCA CGACCCGGTG CGCTGGAAGT ACCACGCCAT CGGCAACTAC TACCTCAACG ATGCCAACCC GCCACGTCGG GGGACCATCT GA
|
Protein sequence | MTTNIITSDT EALNVAEDIA QQLRRDSALR DRERRLPHAE LELFTRSGLW AISVPKAFGG AGVSNVTLAK VIARIAQADG SLGQIPQNHF YGLEVLRVNG TPEQQQRLYA EVLAGRRFGN ALAELGTKTA NERTTRLSRD GDGFRINGRK FYSTGAIYAQ RIPTSVVDDQ GVQQLAFVPA DSQGLQVIDD WSGFGQRTTG SGSVVFDNVY VSAADVVPFQ SAFERPTPVG PLAQILHAAI DTGIARAAYE DALHFVRTRS RPWVDSGLDK ATDDPLTLKS FGHLAIRLHA AEALLERAGE YLDRARDDST ADNVAAASIA VAEARAISTE ISLAAGTALF ELGGSQATLA EHNLDRHWRN ARVHTLHDPV RWKYHAIGNY YLNDANPPRR GTI
|
| |