Gene PputGB1_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0247 
Symbol 
ID5867944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp288691 
End bp289872 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content66% 
IMG OID641545327 
Productacyl-CoA dehydrogenase type 2 
Protein accessionYP_001666496 
Protein GI167031265 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAA ATATCATTAC CAGCGACACC GAAGCCCTGA ATGTTGCCGA AGACATCGCC 
CAGCAACTGC GCCGCGACAG CGCCCTGCGC GACCGCGAGC GCCGCTTGCC GCACGCCGAA
CTGGAGCTGT TCACCCGCTC CGGCCTATGG GCCATCAGCG TGCCCAAGGC CTTCGGTGGC
GCCGGCGTGT CCAATGTCAC CCTGGCCAAG GTCATCGCCC GTATCGCCCA AGCCGACGGC
TCGCTCGGGC AGATCCCGCA AAACCATTTC TACGGCCTGG AAGTACTGCG AGTAAACGGC
ACCCCCGAGC AGCAACAGCG GCTATACGCC GAAGTGTTGG CCGGCCGCCG CTTTGGCAAT
GCCCTGGCCG AGTTGGGCAC CAAGACCGCC AACGAACGCA CCACCCGACT GAGCCGTGAC
GGCGATGGCT TCCGCATCAA CGGCCGCAAG TTCTATTCCA CCGGTGCCAT CTACGCCCAG
CGCATTCCCA CCTCGGTCGT CGACGACCAA GGCGTGCAGC AACTGGCCTT CGTCCCAGCC
GACAGCCAGG GCTTGCAAGT GATCGATGAC TGGAGCGGAT TCGGCCAGCG CACCACCGGC
AGCGGTTCGG TGGTGTTCGA CAACGTGTAC GTCAGCGCCG CCGACGTGGT GCCGTTCCAG
AGTGCCTTCG AGCGCCCTAC CCCGGTCGGG CCGTTGGCGC AGATCCTTCA TGCCGCAATC
GACACCGGCA TCGCCCGCGC GGCTTATGAA GATGCCCTGC ACTTCGTACG TACCCGCAGT
CGTCCGTGGG TCGACTCCGG CCTGGACAAG GCCACGGATG ACCCGCTGAC GTTGAAAAGC
TTCGGCCACC TGGCGATCCG TTTGCACGCC GCCGAGGCCC TGCTGGAGCG CGCCGGTGAA
TACCTCGACC GCGCCCGCGA CGACAGCACC GCCGACAACG TGGCCGCCGC CTCCATCGCC
GTAGCCGAAG CACGGGCCAT CAGCACCGAG ATTTCCCTCG CCGCCGGCAC CGCGCTGTTC
GAACTGGGCG GCAGCCAAGC CACCCTGGCC GAGCACAACC TCGACCGCCA CTGGCGCAAC
GCCCGTGTGC ACACCCTGCA CGACCCGGTG CGCTGGAAGT ACCACGCCAT CGGCAACTAC
TACCTCAACG ATGCCAACCC GCCACGTCGG GGGACCATCT GA
 
Protein sequence
MTTNIITSDT EALNVAEDIA QQLRRDSALR DRERRLPHAE LELFTRSGLW AISVPKAFGG 
AGVSNVTLAK VIARIAQADG SLGQIPQNHF YGLEVLRVNG TPEQQQRLYA EVLAGRRFGN
ALAELGTKTA NERTTRLSRD GDGFRINGRK FYSTGAIYAQ RIPTSVVDDQ GVQQLAFVPA
DSQGLQVIDD WSGFGQRTTG SGSVVFDNVY VSAADVVPFQ SAFERPTPVG PLAQILHAAI
DTGIARAAYE DALHFVRTRS RPWVDSGLDK ATDDPLTLKS FGHLAIRLHA AEALLERAGE
YLDRARDDST ADNVAAASIA VAEARAISTE ISLAAGTALF ELGGSQATLA EHNLDRHWRN
ARVHTLHDPV RWKYHAIGNY YLNDANPPRR GTI