Gene PputGB1_3157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3157 
Symbol 
ID5870942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3532128 
End bp3533351 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content66% 
IMG OID641548273 
Productacyl-CoA dehydrogenase type 2 
Protein accessionYP_001669385 
Protein GI167034154 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCC CTACCGTATC CGCCAACTAC GAAATCCGCA CGCCAGCGGC GCACATCATT 
CGCGATGACG CCGAGGCGCT TGCCGTCGCC TATCAAGTCG CCGAACTGCT GCGCGAGGGC
GCAGCCGAAC GCGACCGCAA CCGCGAAGTA CCGGCCGACA TCGTCGACGC CTTTTCCAAC
AGCGGGCTAT GGGGCATCAC CGTGCCGCGG GCCTACGGTG GCGCCGAAGT ATCGTTCGCC
ACGCTTGCCC GTGTGATCGC CATCGTCTCC GCTGCCGACC CATCCCTTGG GCAAATTCCG
CAAAACCACT ATTGCCTGCT CGAAGACATA CGCCTGCAAG GCACGCCAGA GCAGCAACGC
TACTTCTACG ACCTGGTATT GCAAGGGCAC CGATTTGCCA ACGCCCTGTC GGAAACCGGC
GGCAAAACCG TCCAGGACAT TCGCACACGC CTGGTCGCCG AGGGCGATGG CTACCGCATC
GACGGGCGCA AAGGCTACTG CACCGGCTCG CTGTACGCCC ATTGGCTCGG CGTGCTGGCC
CTGGACGAGC AGGACCGTGC CCAACTGGCC TTCGTGCAAC GAGGCAGCGC CGGCCTGGTG
ATCGTCGATG ACTGGAGCAG CATGGGCCAG CGCACCACGT CCAGCGGCAC GGTGCTGCTC
GACGGCCTGC GGGTGCCGGC ATTCAACCTG TTCCCCAGCT ACCGCTCCTA CGAAAGCCCG
ACCCTCGCCG GCCCCTTCGC TCAGTTGACC ACAGCGGCCA TCGACGCCGG CATCGGCCGC
GCAGCGCTGG ACGACGCCCT CGCGTTCGTG CGTGAGCATG CCCGGCCGTG GATCGATGCC
CAGGTCGACA AGGCCAGCGA AGACCCATTG ACCATCATCC AGGTCGGCTC GCTGGAGATT
CGTCAGGAAG CCGCCGAAGC CCTGCTCGAA CGTGCAGGCC AGGCCCTGGA TGCGGCCAAA
CCCGCCCCTG ATGAAAACAA CGTGGCCCTG GCTTCGATTG CAGTGGCCAA GGCCAAGGTA
CTGACCACCG AGGCCGCCAT CGAAGCCAGT AACCGCCTGT TCGAACTGGG CGGCACGCGC
TCGTCGCTGA CCCGGCACAA TCTCGACCGC CACTGGCGCA ACGCCCGCGT GCACACCCTG
CACGACCCGG TGCGCTGGAA GTACCACCTG GTCGGTAACT GGGCACTGAA CGGCGTCAAG
CCGCCTCGCC ATGACTGGAA CTGA
 
Protein sequence
MPAPTVSANY EIRTPAAHII RDDAEALAVA YQVAELLREG AAERDRNREV PADIVDAFSN 
SGLWGITVPR AYGGAEVSFA TLARVIAIVS AADPSLGQIP QNHYCLLEDI RLQGTPEQQR
YFYDLVLQGH RFANALSETG GKTVQDIRTR LVAEGDGYRI DGRKGYCTGS LYAHWLGVLA
LDEQDRAQLA FVQRGSAGLV IVDDWSSMGQ RTTSSGTVLL DGLRVPAFNL FPSYRSYESP
TLAGPFAQLT TAAIDAGIGR AALDDALAFV REHARPWIDA QVDKASEDPL TIIQVGSLEI
RQEAAEALLE RAGQALDAAK PAPDENNVAL ASIAVAKAKV LTTEAAIEAS NRLFELGGTR
SSLTRHNLDR HWRNARVHTL HDPVRWKYHL VGNWALNGVK PPRHDWN