Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3157 |
Symbol | |
ID | 5870942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3532128 |
End bp | 3533351 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641548273 |
Product | acyl-CoA dehydrogenase type 2 |
Protein accession | YP_001669385 |
Protein GI | 167034154 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCCC CTACCGTATC CGCCAACTAC GAAATCCGCA CGCCAGCGGC GCACATCATT CGCGATGACG CCGAGGCGCT TGCCGTCGCC TATCAAGTCG CCGAACTGCT GCGCGAGGGC GCAGCCGAAC GCGACCGCAA CCGCGAAGTA CCGGCCGACA TCGTCGACGC CTTTTCCAAC AGCGGGCTAT GGGGCATCAC CGTGCCGCGG GCCTACGGTG GCGCCGAAGT ATCGTTCGCC ACGCTTGCCC GTGTGATCGC CATCGTCTCC GCTGCCGACC CATCCCTTGG GCAAATTCCG CAAAACCACT ATTGCCTGCT CGAAGACATA CGCCTGCAAG GCACGCCAGA GCAGCAACGC TACTTCTACG ACCTGGTATT GCAAGGGCAC CGATTTGCCA ACGCCCTGTC GGAAACCGGC GGCAAAACCG TCCAGGACAT TCGCACACGC CTGGTCGCCG AGGGCGATGG CTACCGCATC GACGGGCGCA AAGGCTACTG CACCGGCTCG CTGTACGCCC ATTGGCTCGG CGTGCTGGCC CTGGACGAGC AGGACCGTGC CCAACTGGCC TTCGTGCAAC GAGGCAGCGC CGGCCTGGTG ATCGTCGATG ACTGGAGCAG CATGGGCCAG CGCACCACGT CCAGCGGCAC GGTGCTGCTC GACGGCCTGC GGGTGCCGGC ATTCAACCTG TTCCCCAGCT ACCGCTCCTA CGAAAGCCCG ACCCTCGCCG GCCCCTTCGC TCAGTTGACC ACAGCGGCCA TCGACGCCGG CATCGGCCGC GCAGCGCTGG ACGACGCCCT CGCGTTCGTG CGTGAGCATG CCCGGCCGTG GATCGATGCC CAGGTCGACA AGGCCAGCGA AGACCCATTG ACCATCATCC AGGTCGGCTC GCTGGAGATT CGTCAGGAAG CCGCCGAAGC CCTGCTCGAA CGTGCAGGCC AGGCCCTGGA TGCGGCCAAA CCCGCCCCTG ATGAAAACAA CGTGGCCCTG GCTTCGATTG CAGTGGCCAA GGCCAAGGTA CTGACCACCG AGGCCGCCAT CGAAGCCAGT AACCGCCTGT TCGAACTGGG CGGCACGCGC TCGTCGCTGA CCCGGCACAA TCTCGACCGC CACTGGCGCA ACGCCCGCGT GCACACCCTG CACGACCCGG TGCGCTGGAA GTACCACCTG GTCGGTAACT GGGCACTGAA CGGCGTCAAG CCGCCTCGCC ATGACTGGAA CTGA
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Protein sequence | MPAPTVSANY EIRTPAAHII RDDAEALAVA YQVAELLREG AAERDRNREV PADIVDAFSN SGLWGITVPR AYGGAEVSFA TLARVIAIVS AADPSLGQIP QNHYCLLEDI RLQGTPEQQR YFYDLVLQGH RFANALSETG GKTVQDIRTR LVAEGDGYRI DGRKGYCTGS LYAHWLGVLA LDEQDRAQLA FVQRGSAGLV IVDDWSSMGQ RTTSSGTVLL DGLRVPAFNL FPSYRSYESP TLAGPFAQLT TAAIDAGIGR AALDDALAFV REHARPWIDA QVDKASEDPL TIIQVGSLEI RQEAAEALLE RAGQALDAAK PAPDENNVAL ASIAVAKAKV LTTEAAIEAS NRLFELGGTR SSLTRHNLDR HWRNARVHTL HDPVRWKYHL VGNWALNGVK PPRHDWN
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