| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2362 |
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| Symbol | |
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| ID | 5108204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2607634 |
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| End bp | 2608833 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640503604 |
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| Product | acyl-CoA dehydrogenase type 2 |
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| Protein accession | YP_001187852 |
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| Protein GI | 146307387 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00266653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00112869 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGCAC CTTTGACCTC CACGGTGGCG CTGATTCGCA GCGACGCCGA AGCCCTCGAT
GTGGCCCAGT CCCTGGCCGA GGTACTGGCC CCCGGCAGTG CCGAACGAGA CCGCGAACGG
CGCCTGCCGC ACGCCGAGCT GGAACTGTTC AGCCACTCCG GCCTGTGGGC CATCAGCGTG
CCCAAGGCCT TTGGCGGCGC GGGCGTTTCC AGCGTCACCC TGGCCAAGGT CATCGCCCGC
ATTGCCCAGG CCGATGCCTC GCTCGGGCAG ATTCCGCAGA ACCACTTCTA TGCCCTGGAA
GTGCTGCGCA TCAATGGCAG CGAAGCGCAG CAGCGCCGCC TGTACGGCGA GGTGCTGGCA
GGCCGGCGCT TCGGCAACGC CCTGGCCGAA CTCGGCACCA AAACCGCACT GGATCGCAAC
ACCCGGCTGA GCCGCGATGG CGAGCACTAC CGCGTCAACG GGCGCAAGTT CTACGCCACC
GGCGCGCTGT ATGCGCAGCG CATTCCCACC CTGGCGGTGG ACGAGCACGG CAATGGCCAA
CTGGCCTTCA TCCCTCGCCA GGCGCCCGGC CTGCAGGTGA TAGACGACTG GAGCGGCTTC
GGCCAGCGCA CCACCGGCAG CGGCTCGGTG GTGCTGGACA ACGTGCCGGT GGCCGCCGAG
GACGTGGTGC CGTTTCAGAG CGCCTTCGAC CGCCCGACCA CCGTCGGTCC CTTCGCCCAG
TTGCTGCATG CGGCCATCGA CACCGGCATC GCCCGCGCCG CCTACGAAGA TCTGTTGCAG
TTCGTCCGCC ACAAGTCGCG TCCGTGGATC GACGCCGGCA TCGACAAGGC CAGCGATGAC
CCGCTGACCC AGCAGGAAAT CGGCCGCCTG GTGATCCGCC TGCATGCTAC CGAAGCGCTG
CTGGAACGCG CTGGCGAGTT CGTCGACCGT GCCCAGGCCG CGCCCAACGA ACAGAGCGTG
GCCGCCGCCT CGATCACCGT GGCCGAAGCC CGCGCCATCA GCACCGAGGT CTCGCTGCTG
ATTGCCAGCA AGCTGCTGGA ACTCTCCGGC AGCCGCGCCA CCCTGGCCGA GTACGGCCTC
GACCGGCACT GGCGCAACGC ACGCACCCAC ACGCTGCACG ACCCGGTGCG CTGGAAGTAC
CACGCCATCG GCGACTACCT GCTCAACGAG CGCCTGCCGC CGCGTCGGGG GACCATCTGA
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| Protein sequence | MNAPLTSTVA LIRSDAEALD VAQSLAEVLA PGSAERDRER RLPHAELELF SHSGLWAISV
PKAFGGAGVS SVTLAKVIAR IAQADASLGQ IPQNHFYALE VLRINGSEAQ QRRLYGEVLA
GRRFGNALAE LGTKTALDRN TRLSRDGEHY RVNGRKFYAT GALYAQRIPT LAVDEHGNGQ
LAFIPRQAPG LQVIDDWSGF GQRTTGSGSV VLDNVPVAAE DVVPFQSAFD RPTTVGPFAQ
LLHAAIDTGI ARAAYEDLLQ FVRHKSRPWI DAGIDKASDD PLTQQEIGRL VIRLHATEAL
LERAGEFVDR AQAAPNEQSV AAASITVAEA RAISTEVSLL IASKLLELSG SRATLAEYGL
DRHWRNARTH TLHDPVRWKY HAIGDYLLNE RLPPRRGTI
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