Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0353 |
Symbol | |
ID | 3365829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 377749 |
End bp | 378954 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637650695 |
Product | Acyl-CoA dehydrogenase, C-terminal |
Protein accession | YP_233463 |
Protein GI | 66043622 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.758482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCCA ACCCGAAAGC GCGCGTCAAC GCAGCGTTGA TCACCAGTGA CGCTCAGGCC CTGCACATAG CCCGCGAACT GGCCCTGCAA TTGAAAACCG ACAGCGCGCA ACGCGATCGC GAGCGCCGTT TGCCGCATGC CGAACTCGAC CTGTTCAGCC AGTCCGGTCT GTGGGGCATC AGTGTGCCGC AAGCGTTCGG CGGCGCAGGT GTTTCCAATG TCACCCTGGC CAAGGTGATC CAGCTGATTT CCGAAGCCGA TGGCTCGCTG GGCCAGATTC CACAAAACCA TTTTTACGCT CTGGAAGTGC TGCGTGTGAA CGGCAGTCCG CAGCAACAGG CGCGCTTGTA CGCCGAGGCA CTGGCGGGCG TACGCTTCGG CAATGCGCTG GCCGAACTGG GGACCAGAAC CGCACATGAC CGCACCACTC GCCTGAGCCG CGACGGGGAC GGTTATCGCA TCAACGGCCG CAAGTTCTAC GCCACCGGCG CGCTGTATGC GCAACGTATC CCCACCTCGG TGATTGACGA TGAAGGTGTG CAGCAACTGG TGTTCGTGGC GCACGACAGC GAGGGGCTGA GCGTCATCGA CGACTGGAGC GGTTTCGGGC AGCGCACCAC CGGCAGTGGC TCGGTGGTGT TCGACAATGT GTATGTCAGC GCCAACGATG TGGTGCCGTT CCAGAGCGCC TTCCAGCGCC CTACCACGGT CGGGCCACTG GCGCAGATTC TCCACGCTGC GATCGACACC GGCATTGCCC GAGCGGCCTT CGAGGACGCC CTGACGTTCG TGCAGACGCG TACCCGGCCA TGGATCGATT CGGGTATCGA AAAGGCCGTG GACGACCCGC TGACCCTGCA CAGCTTCGGC AAGCTGGGTA TTCGCCTGCA TGCCGCCGAA GCACTGCTCG AACGCGCCGG GGAATTTCTG GATGTCGCTC AGGCCGACAG CAATGCCGAG ACCGTCGCCG CCGCCTCGAT AGCCGTGGCC GAAGCGCGCG CCATCAGCAC GGAGATTTCC CTGGCAGCCG GCAGCACGCT GTTCGAGCTG GCGGGCAGTC AATCCACACT GGCGGAACAC GGCCTGGATC GCCACTGGCG CAATGCGCGC GTGCATACGC TGCATGACCC GGTGCGCTGG AAGTTTCACG CCATCGGCAA TTACTACCTC AATGAGACTA ATCCGCCCCT GCGGGGAACG ATCTGA
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Protein sequence | MSSNPKARVN AALITSDAQA LHIARELALQ LKTDSAQRDR ERRLPHAELD LFSQSGLWGI SVPQAFGGAG VSNVTLAKVI QLISEADGSL GQIPQNHFYA LEVLRVNGSP QQQARLYAEA LAGVRFGNAL AELGTRTAHD RTTRLSRDGD GYRINGRKFY ATGALYAQRI PTSVIDDEGV QQLVFVAHDS EGLSVIDDWS GFGQRTTGSG SVVFDNVYVS ANDVVPFQSA FQRPTTVGPL AQILHAAIDT GIARAAFEDA LTFVQTRTRP WIDSGIEKAV DDPLTLHSFG KLGIRLHAAE ALLERAGEFL DVAQADSNAE TVAAASIAVA EARAISTEIS LAAGSTLFEL AGSQSTLAEH GLDRHWRNAR VHTLHDPVRW KFHAIGNYYL NETNPPLRGT I
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