Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4516 |
Symbol | |
ID | 5318079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 999986 |
End bp | 1001173 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640776317 |
Product | acyl-CoA dehydrogenase type 2 |
Protein accession | YP_001313249 |
Protein GI | 150376653 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.130533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAGCA TCTCGCAATT CGCCGGAAAG ACCAGACCTG CGCCCCGCCA CATAGAGAGC GAGGAAGAGG CTCTGACGGT AGCAAAAGAC TTGGCATTCC GATTTGCCGA GCGCGCCAGC GAGCGCGATC TTGAACGCAT CCTCCCCCAT GACGAACTCG ACCAGCTGGC ACAGTCAGGA CTGCTGGCGA TCAGCATTCC CTCGGAATAC GAGGGAATCG ACGTCTCAAA CGTCGTCCTG GCCGAGGTGA CGGCAATCCT GTCCGAGGCC GACAGCTCCA TCGGCCAGAT CCCGCAAGGC CATTTTCATG CCCTGGAAGC ACTGCGCCAG TATGCCACAG AAGAGCAAAA GCAATTCTTC TTCGGACGTG CCCGGGCCGG CGACCGCTTC AGCAGCGCAA TTTCGGAAAG CAGCGAAAAA ACAATCGGTA GCCCGATAAC CCGGATAATC GGGGACGGCG CCGGCTACCG CATCAACGGA CGGAAAGAAT ATCTGACCGG CATCCTCTTC GCCGACTGGA TCGCGATCTC GGCTCTGGAC GCGACCGAGC TCATGACCCT ATCCTTTGTC CCGCGCACAA CGGAAGGCGT CCGGATCATC GATGATTGGG ACAGCTTCGG TCAGCGCGTC AATGGCAGCG GCACAGCCAT TCTCGAGAAC ATCCATGTGG ATCGCAGCTC GGTCGTGCCG TATCACCGCG CTTTCGGTCG ACAGACAACG ATCGGTTCCG TCGGCCAGAT CATCAATGCC GGCGTTGATC TCGGCATAGC GCGCGCCGCA TTCCGCGAAA CCCTCGAATA CGTGCGAAAC GGCGCCGATT CATCGGAGGA TGCTTTGGCG ATCGCCAAGA TCGGCGAAGT CGCAATACGC CTCGAGGCGG CCACCGCGCT CATCGAATAT GCCGGACTTA AGGTCGATAC GGCTCAGGTA GACCCGACAG AAGCGCACGC AGCCGAGGCG AGCATCACGG TCACCGCCGC CAAAGTTCTT GCCGCCGAGG CCGCACTGGA GGCATCCAAC ACACTTTTCG ACCTCGCCGG CGCCGCCTCC ACAAAGGTCT CCCAAAATCT GGATCGCTAT TGGCGCAATG CCCGCGCCCA CGCGTCACAG GACCCGCTTC GCCGGAAGCA TCACCTCGTG GGCAACTATC ACCTTAACGG CGTCCGACCG CGCGACGGAT CATTGTGA
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Protein sequence | MGSISQFAGK TRPAPRHIES EEEALTVAKD LAFRFAERAS ERDLERILPH DELDQLAQSG LLAISIPSEY EGIDVSNVVL AEVTAILSEA DSSIGQIPQG HFHALEALRQ YATEEQKQFF FGRARAGDRF SSAISESSEK TIGSPITRII GDGAGYRING RKEYLTGILF ADWIAISALD ATELMTLSFV PRTTEGVRII DDWDSFGQRV NGSGTAILEN IHVDRSSVVP YHRAFGRQTT IGSVGQIINA GVDLGIARAA FRETLEYVRN GADSSEDALA IAKIGEVAIR LEAATALIEY AGLKVDTAQV DPTEAHAAEA SITVTAAKVL AAEAALEASN TLFDLAGAAS TKVSQNLDRY WRNARAHASQ DPLRRKHHLV GNYHLNGVRP RDGSL
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