More than 300 homologs were found in PanDaTox collection
for query gene Gobs_1375 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_1375  acyl-CoA dehydrogenase domain protein  100 
 
 
384 aa  768    Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4184  acyl-CoA dehydrogenase domain protein  63.16 
 
 
390 aa  493  9.999999999999999e-139  Gordonia bronchialis DSM 43247  Bacteria  normal  0.948009  n/a   
 
 
-
 
NC_009921  Franean1_3930  acyl-CoA dehydrogenase domain-containing protein  62.99 
 
 
385 aa  489  1e-137  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0411302 
 
 
-
 
NC_009338  Mflv_4370  acyl-CoA dehydrogenase domain-containing protein  61.46 
 
 
404 aa  478  1e-134  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1974  acyl-CoA dehydrogenase domain-containing protein  62.47 
 
 
392 aa  478  1e-134  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.204851  normal 
 
 
-
 
NC_013510  Tcur_4367  acyl-CoA dehydrogenase domain protein  61.74 
 
 
418 aa  474  1e-133  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1737  acyl-CoA dehydrogenase domain-containing protein  62.43 
 
 
391 aa  468  1.0000000000000001e-131  Mycobacterium sp. JLS  Bacteria  normal  0.375234  normal 
 
 
-
 
NC_009921  Franean1_2710  acyl-CoA dehydrogenase domain-containing protein  60.73 
 
 
395 aa  471  1.0000000000000001e-131  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1756  acyl-CoA dehydrogenase-like protein  62.43 
 
 
391 aa  468  1.0000000000000001e-131  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1803  acyl-CoA dehydrogenase domain-containing protein  62.43 
 
 
391 aa  468  1.0000000000000001e-131  Mycobacterium sp. KMS  Bacteria  normal  0.992024  normal  0.411519 
 
 
-
 
NC_013159  Svir_26310  acyl-CoA dehydrogenase  61.13 
 
 
394 aa  448  1e-125  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.953761 
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  52.38 
 
 
384 aa  416  9.999999999999999e-116  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  54.35 
 
 
384 aa  415  9.999999999999999e-116  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  52.38 
 
 
384 aa  416  9.999999999999999e-116  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  53.44 
 
 
383 aa  415  9.999999999999999e-116  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  54.09 
 
 
384 aa  414  1e-114  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  51.45 
 
 
384 aa  407  1.0000000000000001e-112  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  52.51 
 
 
384 aa  406  1.0000000000000001e-112  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_008686  Pden_0198  butyryl-CoA dehydrogenase  52.36 
 
 
386 aa  407  1.0000000000000001e-112  Paracoccus denitrificans PD1222  Bacteria  normal  0.286709  normal 
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  52.77 
 
 
385 aa  402  1e-111  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  52.24 
 
 
385 aa  402  1e-111  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  52.24 
 
 
385 aa  401  1e-111  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA1088  acyl-CoA dehydrogenase  51.98 
 
 
380 aa  399  9.999999999999999e-111  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  52.51 
 
 
383 aa  401  9.999999999999999e-111  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_012857  Rpic12D_3467  acyl-CoA dehydrogenase domain protein  52.21 
 
 
385 aa  397  1e-109  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0842785 
 
 
-
 
NC_010678  Rpic_4539  acyl-CoA dehydrogenase domain protein  52.21 
 
 
385 aa  397  1e-109  Ralstonia pickettii 12J  Bacteria  normal  0.452852  normal  0.739278 
 
 
-
 
NC_003296  RS01762  putative acyl-CoA dehydrogenase oxidoreductase protein  51.95 
 
 
385 aa  385  1e-106  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.272038 
 
 
-
 
NC_007348  Reut_B5319  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  50.65 
 
 
385 aa  385  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  0.398534  n/a   
 
 
-
 
NC_007974  Rmet_5908  acyl-CoA dehydrogenase-like protein  50.91 
 
 
385 aa  387  1e-106  Cupriavidus metallidurans CH34  Bacteria  normal  0.276142  normal 
 
 
-
 
NC_008781  Pnap_2129  Acyl-CoA dehydrogenase  52.08 
 
 
386 aa  383  1e-105  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0260778 
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  49.47 
 
 
382 aa  379  1e-104  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_009720  Xaut_0909  acyl-CoA dehydrogenase domain-containing protein  51.84 
 
 
388 aa  381  1e-104  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0847  acyl-CoA dehydrogenase domain-containing protein  51.55 
 
 
386 aa  380  1e-104  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009484  Acry_1556  acyl-CoA dehydrogenase domain-containing protein  51.44 
 
 
386 aa  374  1e-102  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1191  acyl-CoA dehydrogenase domain-containing protein  50.91 
 
 
386 aa  374  1e-102  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  47.71 
 
 
382 aa  363  3e-99  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_012792  Vapar_6218  acyl-CoA dehydrogenase domain protein  49.06 
 
 
390 aa  360  3e-98  Variovorax paradoxus S110  Bacteria  normal  0.823092  n/a   
 
 
-
 
NC_007794  Saro_1224  acyl-CoA dehydrogenase-like  47.63 
 
 
394 aa  352  7e-96  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0161366  n/a   
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  46.9 
 
 
395 aa  347  2e-94  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1816  acyl-CoA dehydrogenase-like protein  46.74 
 
 
429 aa  345  5e-94  Cupriavidus metallidurans CH34  Bacteria  normal  0.0196409  hitchhiker  0.006326 
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  47.28 
 
 
398 aa  342  9e-93  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_3010  acyl-CoA dehydrogenase-like protein  45 
 
 
387 aa  340  2.9999999999999998e-92  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.157219 
 
 
-
 
NC_008786  Veis_2500  isovaleryl-CoA dehydrogenase  46.63 
 
 
388 aa  339  4e-92  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.353952  normal 
 
 
-
 
NC_010002  Daci_1165  acyl-CoA dehydrogenase domain-containing protein  44.99 
 
 
389 aa  331  2e-89  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  43.05 
 
 
388 aa  330  3e-89  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_008025  Dgeo_0428  acyl-CoA dehydrogenase-like protein  45.45 
 
 
380 aa  323  3e-87  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.871589  normal  0.2576 
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  42.4 
 
 
386 aa  312  4.999999999999999e-84  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  40.85 
 
 
388 aa  303  5.000000000000001e-81  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  40.85 
 
 
388 aa  301  9e-81  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_011831  Cagg_2382  acyl-CoA dehydrogenase domain protein  38.56 
 
 
389 aa  286  5.999999999999999e-76  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  40.9 
 
 
381 aa  286  5.999999999999999e-76  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  41.16 
 
 
382 aa  285  7e-76  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_010676  Bphyt_4179  acyl-CoA dehydrogenase domain protein  40.43 
 
 
381 aa  280  3e-74  Burkholderia phytofirmans PsJN  Bacteria  normal  0.011291  hitchhiker  0.000381045 
 
 
-
 
NC_008786  Veis_0882  acyl-CoA dehydrogenase domain-containing protein  39.53 
 
 
381 aa  275  1.0000000000000001e-72  Verminephrobacter eiseniae EF01-2  Bacteria  decreased coverage  0.000390729  normal  0.405813 
 
 
-
 
NC_008346  Swol_0488  butyryl-CoA dehydrogenase  38.73 
 
 
379 aa  275  1.0000000000000001e-72  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00678793  n/a   
 
 
-
 
NC_009972  Haur_4391  acyl-CoA dehydrogenase domain-containing protein  37.3 
 
 
386 aa  274  2.0000000000000002e-72  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  39.84 
 
 
400 aa  272  9e-72  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  38.77 
 
 
379 aa  271  1e-71  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  39.51 
 
 
377 aa  270  2.9999999999999997e-71  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_2307  acyl-CoA dehydrogenase domain protein  39.35 
 
 
381 aa  268  1e-70  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  36.1 
 
 
379 aa  266  5.999999999999999e-70  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  36.1 
 
 
402 aa  265  8e-70  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  36.1 
 
 
379 aa  264  2e-69  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_3313  acyl-CoA dehydrogenase domain-containing protein  39.73 
 
 
384 aa  263  4e-69  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1260  acyl-CoA dehydrogenase domain-containing protein  38.06 
 
 
394 aa  263  4e-69  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.334789  normal 
 
 
-
 
NC_009675  Anae109_2163  acyl-CoA dehydrogenase domain-containing protein  39.84 
 
 
389 aa  262  6e-69  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.820192  normal  0.287496 
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  37.17 
 
 
379 aa  262  6e-69  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  40.38 
 
 
375 aa  262  6e-69  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  37.11 
 
 
379 aa  262  6.999999999999999e-69  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_013744  Htur_4358  acyl-CoA dehydrogenase domain protein  39.25 
 
 
381 aa  261  1e-68  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0892384  n/a   
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  37.17 
 
 
379 aa  261  1e-68  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
NC_008346  Swol_0268  butyryl-CoA dehydrogenase  37.87 
 
 
379 aa  261  1e-68  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  38.32 
 
 
379 aa  261  2e-68  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_011146  Gbem_2826  acyl-CoA dehydrogenase domain protein  39.69 
 
 
385 aa  260  2e-68  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2867  Acyl-CoA dehydrogenase-like  38.98 
 
 
375 aa  260  3e-68  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.967944  normal  0.115681 
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  38.71 
 
 
376 aa  260  3e-68  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_012918  GM21_1386  acyl-CoA dehydrogenase domain protein  39.69 
 
 
385 aa  259  5.0000000000000005e-68  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013525  Tter_0364  acyl-CoA dehydrogenase domain protein  37.23 
 
 
386 aa  259  6e-68  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_4700  acyl-CoA dehydrogenase domain protein  39.95 
 
 
384 aa  258  9e-68  Conexibacter woesei DSM 14684  Bacteria  normal  0.201387  normal  0.86731 
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  38.24 
 
 
379 aa  258  1e-67  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  38.46 
 
 
380 aa  258  1e-67  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1804  butyryl-CoA dehydrogenase  40.05 
 
 
386 aa  258  1e-67  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  38.48 
 
 
379 aa  257  3e-67  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2471  butyryl-CoA dehydrogenase  37.06 
 
 
597 aa  257  3e-67  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  38.71 
 
 
389 aa  256  6e-67  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2136  acyl-CoA dehydrogenase domain-containing protein  38.89 
 
 
380 aa  255  8e-67  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.281355 
 
 
-
 
NC_007760  Adeh_1647  butyryl-CoA dehydrogenase  39.04 
 
 
379 aa  255  8e-67  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1710  Acyl-CoA dehydrogenase-like  38.8 
 
 
386 aa  254  1.0000000000000001e-66  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.671564 
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  37.63 
 
 
376 aa  254  1.0000000000000001e-66  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_013440  Hoch_3775  acyl-CoA dehydrogenase domain protein  42.05 
 
 
386 aa  255  1.0000000000000001e-66  Haliangium ochraceum DSM 14365  Bacteria  normal  0.212433  normal  0.155443 
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  37.94 
 
 
379 aa  255  1.0000000000000001e-66  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  37.94 
 
 
379 aa  254  2.0000000000000002e-66  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_2909  acyl-CoA dehydrogenase domain protein  39.47 
 
 
389 aa  254  2.0000000000000002e-66  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.214496  normal 
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  37.94 
 
 
379 aa  254  2.0000000000000002e-66  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  37.94 
 
 
379 aa  254  2.0000000000000002e-66  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_013441  Gbro_1029  acyl-CoA dehydrogenase domain protein  39.11 
 
 
387 aa  253  3e-66  Gordonia bronchialis DSM 43247  Bacteria  normal  0.239684  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  37.94 
 
 
379 aa  253  3e-66  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_011145  AnaeK_2211  acyl-CoA dehydrogenase domain protein  38.77 
 
 
379 aa  253  3e-66  Anaeromyxobacter sp. K  Bacteria  normal  0.0439927  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  37.94 
 
 
379 aa  253  4.0000000000000004e-66  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0264  acyl-CoA dehydrogenase domain-containing protein  36.94 
 
 
394 aa  253  4.0000000000000004e-66  Meiothermus ruber DSM 1279  Bacteria  normal  0.0644181  normal  0.99067 
 
 
-
 
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