56 homologs were found in PanDaTox collection
for query gene GSU2183 on replicon NC_002939
Organism: Geobacter sulfurreducens PCA



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002939  GSU2183  fic family protein  100 
 
 
491 aa  1006    Geobacter sulfurreducens PCA  Bacteria  normal  0.723486  n/a   
 
 
-
 
NC_009426  Saro_3975  filamentation induced by cAMP protein Fic  43.33 
 
 
495 aa  401  9.999999999999999e-111  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.186681  n/a   
 
 
-
 
NC_009379  Pnuc_1123  filamentation induced by cAMP protein Fic  39.48 
 
 
499 aa  338  9.999999999999999e-92  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.0705826  n/a   
 
 
-
 
NC_010831  Cphamn1_0716  filamentation induced by cAMP protein Fic  39.28 
 
 
498 aa  321  1.9999999999999998e-86  Chlorobium phaeobacteroides BS1  Bacteria  normal  hitchhiker  0.000120518 
 
 
-
 
NC_008639  Cpha266_0640  filamentation induced by cAMP protein Fic  39.49 
 
 
501 aa  319  6e-86  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4097  filamentation induced by cAMP protein Fic  37.15 
 
 
544 aa  302  1e-80  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_1784  fic family protein  40.16 
 
 
393 aa  263  4e-69  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.0465792 
 
 
-
 
NC_009483  Gura_2737  filamentation induced by cAMP protein Fic  26.67 
 
 
251 aa  63.9  0.000000005  Geobacter uraniireducens Rf4  Bacteria  normal  0.0264056  n/a   
 
 
-
 
NC_011353  ECH74115_4959  Fic family protein  24.67 
 
 
431 aa  64.3  0.000000005  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_3916  Fic family protein  24.67 
 
 
431 aa  64.3  0.000000005  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0160  filamentation induced by cAMP protein Fic  28.33 
 
 
245 aa  57.8  0.0000004  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.132154  n/a   
 
 
-
 
NC_008942  Mlab_0909  hypothetical protein  26.46 
 
 
328 aa  56.2  0.000001  Methanocorpusculum labreanum Z  Archaea  normal  0.27357  normal 
 
 
-
 
NC_009943  Dole_0828  filamentation induced by cAMP protein Fic  33.33 
 
 
509 aa  54.7  0.000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_0970  filamentation induced by cAMP protein Fic  27.18 
 
 
247 aa  54.3  0.000005  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.952557  n/a   
 
 
-
 
NC_008530  LGAS_1049  Fic family protein  26.32 
 
 
271 aa  53.9  0.000007  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.00000030649  normal 
 
 
-
 
NC_006369  lpl2288  hypothetical protein  23.74 
 
 
502 aa  53.9  0.000007  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013173  Dbac_1233  filamentation induced by cAMP protein Fic  28.73 
 
 
248 aa  52.8  0.00001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2613  filamentation induced by cAMP protein Fic  27.37 
 
 
248 aa  53.1  0.00001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.427308  normal 
 
 
-
 
NC_010718  Nther_2564  filamentation induced by cAMP protein Fic  22.83 
 
 
243 aa  51.6  0.00003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_2545  filamentation induced by cAMP protein Fic  25.13 
 
 
247 aa  51.6  0.00003  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.992105  normal 
 
 
-
 
NC_011832  Mpal_1350  filamentation induced by cAMP protein Fic  27.54 
 
 
443 aa  50.8  0.00005  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.470357 
 
 
-
 
NC_007778  RPB_3058  filamentation induced by cAMP protein Fic  37.68 
 
 
541 aa  50.4  0.00007  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0810  filamentation induced by cAMP protein Fic  31.18 
 
 
267 aa  50.4  0.00008  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0799  filamentation induced by cAMP protein Fic  31.18 
 
 
267 aa  50.4  0.00008  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_2833  filamentation induced by cAMP protein Fic  31.71 
 
 
512 aa  49.7  0.0001  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0315  filamentation induced by cAMP protein Fic  27.75 
 
 
398 aa  49.7  0.0001  Polaromonas sp. JS666  Bacteria  normal  0.300424  normal 
 
 
-
 
NC_009635  Maeo_0664  filamentation induced by cAMP protein Fic  25.99 
 
 
434 aa  48.5  0.0002  Methanococcus aeolicus Nankai-3  Archaea  normal  0.0557891  n/a   
 
 
-
 
NC_012918  GM21_2726  filamentation induced by cAMP protein Fic  27.98 
 
 
395 aa  48.9  0.0002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008609  Ppro_2285  filamentation induced by cAMP protein Fic  36.71 
 
 
250 aa  48.1  0.0004  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0233  fic family protein  25.88 
 
 
377 aa  47.8  0.0004  Treponema denticola ATCC 35405  Bacteria  normal  0.638848  n/a   
 
 
-
 
NC_011004  Rpal_1106  filamentation induced by cAMP protein Fic  37.88 
 
 
533 aa  47.8  0.0004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0452  fic family protein  22.42 
 
 
261 aa  47.8  0.0004  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0838  filamentation induced by cAMP protein Fic  24.71 
 
 
505 aa  48.1  0.0004  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2836  filamentation induced by cAMP protein Fic  37.84 
 
 
250 aa  47.8  0.0004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_1335  Fic family protein  26.09 
 
 
252 aa  47  0.0009  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.324562  n/a   
 
 
-
 
NC_002939  GSU0168  Fic family protein  25.54 
 
 
388 aa  46.2  0.001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0207  filamentation induced by cAMP protein Fic  22.45 
 
 
299 aa  46.2  0.001  Atopobium parvulum DSM 20469  Bacteria  normal  hitchhiker  0.00576684 
 
 
-
 
NC_011757  Mchl_1058  filamentation induced by cAMP protein Fic  27.34 
 
 
529 aa  46.6  0.001  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.620217 
 
 
-
 
NC_010816  BLD_0340  hypothetical protein  23.83 
 
 
240 aa  46.6  0.001  Bifidobacterium longum DJO10A  Bacteria  normal  0.0522117  n/a   
 
 
-
 
NC_008609  Ppro_0217  filamentation induced by cAMP protein Fic  26.42 
 
 
508 aa  45.8  0.002  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2207  hypothetical protein  25 
 
 
348 aa  45.4  0.002  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.00000284697  n/a   
 
 
-
 
NC_011060  Ppha_2616  death-on-curing family protein  21.97 
 
 
261 aa  45.8  0.002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0277  filamentation induced by cAMP protein Fic  27.78 
 
 
508 aa  45.8  0.002  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0000636262  n/a   
 
 
-
 
NC_009727  CBUD_2174  Fic family protein  25 
 
 
348 aa  45.4  0.002  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_2116  filamentation induced by cAMP protein Fic  23.9 
 
 
426 aa  45.1  0.003  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_008554  Sfum_2057  filamentation induced by cAMP protein Fic  26.06 
 
 
377 aa  45.1  0.003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.280737  normal 
 
 
-
 
NC_007511  Bcep18194_B2094  filamentation induced by cAMP protein Fic  25.24 
 
 
251 aa  45.1  0.003  Burkholderia sp. 383  Bacteria  normal  0.437335  normal 
 
 
-
 
NC_002967  TDE2745  fic family protein  32.47 
 
 
271 aa  45.1  0.003  Treponema denticola ATCC 35405  Bacteria  normal  0.413938  n/a   
 
 
-
 
NC_008228  Patl_1889  filamentation induced by cAMP protein Fic  54.84 
 
 
454 aa  45.4  0.003  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1081  filamentation induced by cAMP protein Fic  25.59 
 
 
464 aa  45.1  0.003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_0779  filamentation induced by cAMP protein Fic  23.32 
 
 
236 aa  45.1  0.003  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1166  filamentation induced by cAMP protein Fic  25.89 
 
 
252 aa  44.7  0.004  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0608775 
 
 
-
 
NC_007519  Dde_3441  hypothetical protein  26.83 
 
 
253 aa  44.7  0.004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0191  filamentation induced by cAMP protein Fic  39.62 
 
 
508 aa  44.7  0.004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2123  hypothetical protein  28.57 
 
 
368 aa  44.3  0.005  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0995  filamentation induced by cAMP protein Fic  28.57 
 
 
386 aa  43.9  0.006  Opitutus terrae PB90-1  Bacteria  normal  0.0390266  hitchhiker  0.00286673 
 
 
-
 
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