Gene Memar_2116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2116 
Symbol 
ID4847794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2106187 
End bp2107467 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content51% 
IMG OID640116825 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_001048023 
Protein GI126180058 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCCC CTCGCACTCC CGAATACTCT CCGGCAGATG TAAAGAAGGC CTGGGAGCAT 
GCGGATACCA GAGATGTGAT CGACGCGGTC TTCAACTACA ACAAACGGTA CCTGCACTGG
GAGGAACTCA AATGGCGCGA TCTCCCGGTA GACCCCCTTT ACGTCTGGAT ACTGATGAAG
GCCTTCAGAG AGAGGGATAT GAAATATGTC TCGTTCGACG ATCTTCGGCT GAAATATAAC
CTTCTTGATG ATTTTCTCGA AAACCTTCAT TTTCTCGACA GATCGGCAGC GGAGATCATC
TCATCGGGCC TCGATTCGCG GCCCCAGGAT CGGAACCGGT TCATCACCAA CTCCCTGATG
GAAGAGGCGA TTGCATCGAG CCAGATTGAA GGAGCCGCAG TCACGAGGAC GATTGCAAAA
AAGATGCTCC GTGAACAGAG GAAGCCCGCC ACGAAAGACG AGAGGATGAT CCTGAATAAC
TACATCACGA TGAAGAGGAT CACGCAGGTA AAAGACGAAG ATCTGACCCC GGAGTTGATC
TTAGAGATCC ACAAGACCAT CACCCGGGAT ACGCTCGAAG ATCCGAACGA CGAAGGGAGA
TTCAGGGACA ACAACGAGAT CAGGGTCTTT GATATGCGGG GCAATGTCCT GCACACGCCT
CCCGATTTCG CGTTGATCGA AGGACTCATC GAGGAACTCT GCGCCTTTGC AAACAACGAC
GACGGGCAGT TCATCCATCC GGTGATCAAA GGCATCATCC TGCACTTCCT GATAGGATAC
ATACATCCGT TCAATGACGG AAATGGTCGG ACTGCACGGA GTATCTTTTA CTGGTATATG
CTGCGGAAGG ACTACTGGCT GTTCGAATAT ATGGCGGTAT CGAGAGCGAT AAAAGACGCG
GAGGGGCAGT ACAAACTCGC ATACCTCTAC ACCGAGAGCG ACGAAAACGA CCTCACGTAT
TTCATCCGCT ACAATCTCGC GGCAGTAAAG ACCGCGGTCG ACAATATCCG GAAGTACATC
GAGAAGAAGC AGGGAGAGAG CAAACAGACG TTGACCATTC TTCAAAAGAA CGAGGGGCTG
AGCCTTCGCC AGGCAGAGAT CATCAAATCC CTTATCAAAC ATCCGGATAA GCCGATCACG
ATCAAGGAGA TCGTCGAGAC ATACCGTGTG GCCTATGGAA CGGCAAGAAG CGATCTCTTC
CGACTCGAAG AGCTGGGATA CCTGGCGAAG CGGAAGTCGG GCAAGGAGTA TATCTTCATA
TTCAGGGGTT TGAAGGAGTG A
 
Protein sequence
MKPPRTPEYS PADVKKAWEH ADTRDVIDAV FNYNKRYLHW EELKWRDLPV DPLYVWILMK 
AFRERDMKYV SFDDLRLKYN LLDDFLENLH FLDRSAAEII SSGLDSRPQD RNRFITNSLM
EEAIASSQIE GAAVTRTIAK KMLREQRKPA TKDERMILNN YITMKRITQV KDEDLTPELI
LEIHKTITRD TLEDPNDEGR FRDNNEIRVF DMRGNVLHTP PDFALIEGLI EELCAFANND
DGQFIHPVIK GIILHFLIGY IHPFNDGNGR TARSIFYWYM LRKDYWLFEY MAVSRAIKDA
EGQYKLAYLY TESDENDLTY FIRYNLAAVK TAVDNIRKYI EKKQGESKQT LTILQKNEGL
SLRQAEIIKS LIKHPDKPIT IKEIVETYRV AYGTARSDLF RLEELGYLAK RKSGKEYIFI
FRGLKE