| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1049 |
|---|
| Symbol | |
|---|
| ID | 4439722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1055414 |
|---|
| End bp | 1056229 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 639672891 |
|---|
| Product | Fic family protein |
|---|
| Protein accession | YP_814861 |
|---|
| Protein GI | 116629689 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3177] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01550] death-on-curing family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000030649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 89 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATTT ATACTAAATT AACTGATCTT CGTGATAAAA TGAATACCTT TCGTCCCTTA
TCCAAAGAAG AAGTAGAAAG TATTGAAAAA GATAAAAAAT ATGATCATAT TTGGTCATCA
AATGCTATTG AAGGAAGTTC TTTATCCAAG TATGAAACTG CTGCTTTATT AGAAACTGGT
TTAACAGTAC ATGGGAAACC GTTCGCAGAT CATTTGGCAG CACTTGATTT GAGTAGAGCT
TACGATTATG TTCAAGAATT AGCAATTGGA AAATTGCCTC TTGATGAAAT TGCTATTCGT
GATATTAATC GCCTAGTAAC TTATTCTGAT AATCCTACTA AACGAGCAGA GGCTGGTCAG
TATCGTCAAA TTAAAGTATG GCCTAATGGC GTACCAGAAG TACATTATGC GGATCCAAGT
GATATTCCTA ATGACATGCA AAAACTAATT CAGTGGTATC AAGAAGTAGA GGGAAAAGAG
CACCCAGTTA AAGTGGCTGC TATGCTTCAT TTGAAGTTTG TTACTATTCA TCCCTTTAGA
GATGGAAATA GTCGAACTGC ACGACTTTTA ATGAATTTTG AATTAGTAAA GCATGGTTAT
TTGATAATTA ATATTCAACC AGATAAGATT AGTCGAAATG CTTATATGGA AGCTTTAAAA
CAAGCACAAA TTAAGGATAA TTATGAGTCA TTTATTGAAT TAGTGGCTGA TTATGAGCAA
GATGAATTAG ATAAGCGAAT AGATTTGTTA ACTAGGATTG AAAAAGAAAG AAAATTCGCA
CAAAGTCAAA CTAGATTGGA TAAGTTTGAT AAGTAA
|
|---|
| Protein sequence | MQIYTKLTDL RDKMNTFRPL SKEEVESIEK DKKYDHIWSS NAIEGSSLSK YETAALLETG
LTVHGKPFAD HLAALDLSRA YDYVQELAIG KLPLDEIAIR DINRLVTYSD NPTKRAEAGQ
YRQIKVWPNG VPEVHYADPS DIPNDMQKLI QWYQEVEGKE HPVKVAAMLH LKFVTIHPFR
DGNSRTARLL MNFELVKHGY LIINIQPDKI SRNAYMEALK QAQIKDNYES FIELVADYEQ
DELDKRIDLL TRIEKERKFA QSQTRLDKFD K
|
|---|
| |