Gene BLD_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0340 
Symbol 
ID6364596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp417940 
End bp418662 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content59% 
IMG OID642679490 
Producthypothetical protein 
Protein accessionYP_001954284 
Protein GI189439203 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0522117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGCT ATGTCTACAA CTCCAACGCG ATCGAGGGAT CCACGCTGAC GCTTGAGGAC 
ACCGAACTGG TGTTGGAGGG CGAGTTCGTG CCGACCGACT CGCCGGCAAG ATACATCTTC
GCTGCCCGTG GCGTTGCGGA TGGCATGGCC TATGCGGAAC GATTCGCTGA AGAGGAGCGG
ACGCTGAGTG TCGAGATGAT CCAAAAGCTG CATGAAGTCA CCGCATTGGA CATGCAGCCC
GCGCTCAGGG GTCGGTTCCG CCCCTACGGC TACCAGGCAA GGATCACCGC CACCCGAGTG
AAGACCGCCG ACCCACTTGA AATCTACGAG GACATGGAAG CGCTCGTGGA CGCGGTGAAC
GGTTCCAAAG ACCACCCGAT CCTCAAAGCT GCCGGATTCC ACGCGATGTT CGAGAACATC
CATCCATTCA CGGACGGCAA CGGACGAACC GGGCGACAGA TTCTGAATCT CATGCTCATG
ACTGCCGGCT ACCGGCCCGT AGCAATCAAA CATGATGCCG GCCGCAGCTA TGGGAAAAGT
CTGGAAGCAT GGCAGGTTGA CGGCGATCCC AAGCCGTTCA TTTCCCAGCT TGTCCAATGC
GTTGATCAGG AAGAGCGCGC CGTAGCGGAA ATCGTCGGCA GATTAAGAGA GAACCCTTTC
TCGGAAAACG CCATCGACGG GATTGGTCTC GAAGACGGTC CGGCACGAGG GCGTTCCCTC
TGA
 
Protein sequence
MARYVYNSNA IEGSTLTLED TELVLEGEFV PTDSPARYIF AARGVADGMA YAERFAEEER 
TLSVEMIQKL HEVTALDMQP ALRGRFRPYG YQARITATRV KTADPLEIYE DMEALVDAVN
GSKDHPILKA AGFHAMFENI HPFTDGNGRT GRQILNLMLM TAGYRPVAIK HDAGRSYGKS
LEAWQVDGDP KPFISQLVQC VDQEERAVAE IVGRLRENPF SENAIDGIGL EDGPARGRSL