Gene Coch_0779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0779 
Symbol 
ID8367197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp939063 
End bp939773 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content39% 
IMG OID644983206 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_003140897 
Protein GI256819618 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTAA AACAATTATT ACAAGAGAAA GAAACAAAGC TAAAGGGCGG TATTTATCAC 
CGCACTCAAA TAGATTTTTG CTATAATTCC AATCATATAG AAGGTAGCCA GCTCACACAC
GAACAAACGC GCTATATTTT CGAAACCAAT ACCATTGGCA TTACAGAACA AGCGGTAAAA
ATTGATGATA TTCTCGAAGC TATTAATCAT TTTAAGGCTT TTGATGCAAT GTTGGAATGC
GCTACTGAAC CTCTTACCCA AGAGATGATT AAAACCTTTC ACAGCATTCT CAAAGCAGAT
ACTTCCGATA GCAATAAAGA TTGGTTTGCC ATAGGCGACT ATAAGAAACT ACCTAACGAA
GTAGGAGGCA ATGCCACCTC TCTGCCTGAA AATGTAGAAC AGGAAATGAC CGCTTTGTTA
GTCGATTACC ACCAAAAACA AACCAAAACC TTTCGTGATT TGGTCGATTT TCATTGGCGT
TTTGAAACCA TTCACCCCTT TCAAGACGGC AACGGACGCA TAGGGCGTTT GTTGCTCTTT
AAAGAATGTT TAGCTAACAA CATAGTGCCT TTTATCATTA CCGAACAACT CCGTTGGTTC
TACTATCGCG GGCTACAAAA TTGGCAACAA ACAGAAGGCT TTTTGCTCGA TACTTGCTTA
ACAGCACAAG ATGAGTACAA GGCAGTAATG GCGTATTTTA GAATTTGCTA A
 
Protein sequence
MLLKQLLQEK ETKLKGGIYH RTQIDFCYNS NHIEGSQLTH EQTRYIFETN TIGITEQAVK 
IDDILEAINH FKAFDAMLEC ATEPLTQEMI KTFHSILKAD TSDSNKDWFA IGDYKKLPNE
VGGNATSLPE NVEQEMTALL VDYHQKQTKT FRDLVDFHWR FETIHPFQDG NGRIGRLLLF
KECLANNIVP FIITEQLRWF YYRGLQNWQQ TEGFLLDTCL TAQDEYKAVM AYFRIC