More than 300 homologs were found in PanDaTox collection
for query gene Franean1_2716 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_2716  short-chain dehydrogenase/reductase SDR  100 
 
 
265 aa  534  1e-151  Frankia sp. EAN1pec  Bacteria  normal  0.839992  normal 
 
 
-
 
NC_008146  Mmcs_3782  3-alpha-hydroxysteroid dehydrogenase  39.29 
 
 
274 aa  155  6e-37  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3786  3-alpha-hydroxysteroid dehydrogenase  39.29 
 
 
274 aa  155  6e-37  Mycobacterium sp. JLS  Bacteria  normal  0.71727  normal 
 
 
-
 
NC_008705  Mkms_3855  3-alpha-hydroxysteroid dehydrogenase  39.29 
 
 
274 aa  155  6e-37  Mycobacterium sp. KMS  Bacteria  normal  0.420893  normal 
 
 
-
 
NC_003296  RS05193  3-alpha-hydroxysteroid dehydrogenase  39.92 
 
 
255 aa  155  7e-37  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.00510841  normal  0.489476 
 
 
-
 
NC_008048  Sala_0895  3-alpha-hydroxysteroid dehydrogenase  37.55 
 
 
274 aa  154  2e-36  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.013191  normal 
 
 
-
 
NC_010513  Xfasm12_1462  3-alpha-hydroxysteroid dehydrogenase  39.37 
 
 
255 aa  150  2e-35  Xylella fastidiosa M12  Bacteria  normal  0.759595  n/a   
 
 
-
 
NC_009654  Mmwyl1_0504  3-alpha-hydroxysteroid dehydrogenase  37.5 
 
 
255 aa  149  6e-35  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4796  3-alpha-hydroxysteroid dehydrogenase  35.32 
 
 
261 aa  146  4.0000000000000006e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.616684  normal  0.0456615 
 
 
-
 
NC_008726  Mvan_2008  short-chain dehydrogenase/reductase SDR  35.74 
 
 
261 aa  145  5e-34  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.959898  normal  0.356317 
 
 
-
 
NC_007005  Psyr_2733  3-alpha-hydroxysteroid dehydrogenase  35.8 
 
 
255 aa  144  2e-33  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.694898  normal  0.496395 
 
 
-
 
NC_004578  PSPTO_2949  oxidoreductase, short-chain dehydrogenase/reductase family  36.65 
 
 
255 aa  143  3e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.084933  n/a   
 
 
-
 
NC_010577  XfasM23_1390  3-alpha-hydroxysteroid dehydrogenase  38.19 
 
 
255 aa  143  3e-33  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4885  3-alpha-hydroxysteroid dehydrogenase  34.92 
 
 
261 aa  140  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.726379 
 
 
-
 
NC_007948  Bpro_0129  3-alpha-hydroxysteroid dehydrogenase  36.9 
 
 
255 aa  135  7.000000000000001e-31  Polaromonas sp. JS666  Bacteria  normal  normal  0.735405 
 
 
-
 
NC_009338  Mflv_2405  3-alpha-hydroxysteroid dehydrogenase  40.32 
 
 
271 aa  135  9.999999999999999e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4338  short-chain dehydrogenase/reductase SDR  35.52 
 
 
293 aa  132  3.9999999999999996e-30  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.305242  normal 
 
 
-
 
NC_009511  Swit_2019  short-chain dehydrogenase/reductase SDR  33.96 
 
 
291 aa  125  9e-28  Sphingomonas wittichii RW1  Bacteria  normal  0.400564  normal 
 
 
-
 
NC_009656  PSPA7_2450  3-alpha-hydroxysteroid dehydrogenase  34.52 
 
 
257 aa  122  7e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0588797  n/a   
 
 
-
 
NC_009921  Franean1_4729  short-chain dehydrogenase/reductase SDR  34.6 
 
 
274 aa  122  8e-27  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_1724  short-chain dehydrogenase/reductase SDR  36.64 
 
 
266 aa  115  6.9999999999999995e-25  Arthrobacter sp. FB24  Bacteria  normal  0.0573572  n/a   
 
 
-
 
NC_008726  Mvan_4241  3-alpha-hydroxysteroid dehydrogenase  37.66 
 
 
251 aa  115  8.999999999999998e-25  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2918  short-chain dehydrogenase/reductase SDR  35.21 
 
 
282 aa  109  6e-23  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4321  short-chain dehydrogenase/reductase SDR  34.62 
 
 
274 aa  101  1e-20  Frankia sp. EAN1pec  Bacteria  normal  normal  0.435201 
 
 
-
 
NC_009921  Franean1_0581  short-chain dehydrogenase/reductase SDR  34.62 
 
 
274 aa  100  2e-20  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0690  short-chain dehydrogenase/reductase SDR  32.32 
 
 
265 aa  83.6  0.000000000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.473951 
 
 
-
 
NC_009457  VC0395_A1193  short chain dehydrogenase/reductase family oxidoreductase  29.2 
 
 
252 aa  81.3  0.00000000000002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B3095  3-oxoacyl-[acyl-carrier-protein] reductase  29.85 
 
 
246 aa  80.5  0.00000000000003  Burkholderia sp. 383  Bacteria  normal  normal  0.025547 
 
 
-
 
NC_009972  Haur_1658  short-chain dehydrogenase/reductase SDR  30.15 
 
 
247 aa  79  0.00000000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6404  3-oxoacyl-[acyl-carrier-protein] reductase  29.96 
 
 
246 aa  77  0.0000000000003  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1056  oxidoreductase, short chain dehydrogenase/reductase family  28.1 
 
 
254 aa  76.3  0.0000000000006  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1326  short-chain dehydrogenase/reductase SDR  30.15 
 
 
254 aa  75.9  0.0000000000006  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.393683 
 
 
-
 
NC_011757  Mchl_1526  short-chain dehydrogenase/reductase SDR  30.15 
 
 
254 aa  75.9  0.0000000000007  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A3466  glucose 1-dehydrogenase  27.38 
 
 
247 aa  75.5  0.0000000000008  Bacillus cereus B4264  Bacteria  normal  0.0764776  n/a   
 
 
-
 
NC_008752  Aave_2790  short-chain dehydrogenase/reductase SDR  30.8 
 
 
269 aa  75.1  0.000000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B1783  glucose 1-dehydrogenase  26.89 
 
 
247 aa  74.3  0.000000000002  Bacillus cereus G9842  Bacteria  normal  0.88349  normal 
 
 
-
 
NC_007412  Ava_C0109  short chain dehydrogenase  30.18 
 
 
251 aa  73.9  0.000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3536  short-chain dehydrogenase/reductase SDR  31.94 
 
 
274 aa  73.6  0.000000000003  Polaromonas sp. JS666  Bacteria  normal  normal  0.446578 
 
 
-
 
NC_010512  Bcenmc03_6840  short-chain dehydrogenase/reductase SDR  29.79 
 
 
254 aa  73.6  0.000000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2035  short-chain dehydrogenase/reductase SDR  29.01 
 
 
248 aa  73.2  0.000000000004  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.000355798  normal  0.0941785 
 
 
-
 
NC_008009  Acid345_3738  short-chain dehydrogenase/reductase SDR  26.64 
 
 
252 aa  73.2  0.000000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.87063  normal 
 
 
-
 
NC_007005  Psyr_0904  Short-chain dehydrogenase/reductase SDR  27.9 
 
 
254 aa  72.4  0.000000000007  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000395  3-oxoacyl-[acyl-carrier protein] reductase  28.36 
 
 
252 aa  72  0.000000000008  Vibrio sp. Ex25  Bacteria  normal  0.36672  n/a   
 
 
-
 
NC_011992  Dtpsy_1869  short-chain dehydrogenase/reductase SDR  29.5 
 
 
263 aa  72  0.000000000008  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2865  short-chain dehydrogenase/reductase SDR  30.83 
 
 
255 aa  71.6  0.00000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5100  putative short-chain dehydrogenase/reductase SDR family protein  28.12 
 
 
261 aa  72  0.00000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.917841  normal  0.678944 
 
 
-
 
NC_013235  Namu_1837  short-chain dehydrogenase/reductase SDR  30.58 
 
 
258 aa  71.2  0.00000000002  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00311801  normal  0.334735 
 
 
-
 
NC_013132  Cpin_4318  short-chain dehydrogenase/reductase SDR  27.78 
 
 
264 aa  70.5  0.00000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.319531  normal  0.0832513 
 
 
-
 
NC_008061  Bcen_4368  short chain dehydrogenase  28.32 
 
 
259 aa  70.9  0.00000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.494566  n/a   
 
 
-
 
NC_009077  Mjls_2043  short chain dehydrogenase  28.21 
 
 
257 aa  70.9  0.00000000002  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_2060  short chain dehydrogenase  28.21 
 
 
257 aa  70.9  0.00000000002  Mycobacterium sp. MCS  Bacteria  normal  0.256692  n/a   
 
 
-
 
NC_008543  Bcen2424_3998  short chain dehydrogenase  28.32 
 
 
259 aa  70.9  0.00000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.219529  normal  0.855518 
 
 
-
 
NC_013946  Mrub_1897  short-chain dehydrogenase/reductase SDR  31.29 
 
 
247 aa  70.9  0.00000000002  Meiothermus ruber DSM 1279  Bacteria  normal  hitchhiker  0.00100219 
 
 
-
 
NC_008705  Mkms_2106  short chain dehydrogenase  28.21 
 
 
257 aa  70.9  0.00000000002  Mycobacterium sp. KMS  Bacteria  normal  normal  0.077628 
 
 
-
 
NC_013744  Htur_3801  short-chain dehydrogenase/reductase SDR  30.37 
 
 
251 aa  70.1  0.00000000004  Haloterrigena turkmenica DSM 5511  Archaea  hitchhiker  0.00700482  n/a   
 
 
-
 
NC_009664  Krad_2190  short chain dehydrogenase  29.03 
 
 
258 aa  70.1  0.00000000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_2473  short-chain dehydrogenase/reductase SDR  27.44 
 
 
256 aa  70.1  0.00000000004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4062  short chain dehydrogenase  28.26 
 
 
257 aa  69.7  0.00000000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.171649  normal  0.787909 
 
 
-
 
NC_009436  Ent638_0279  short chain dehydrogenase  27.01 
 
 
259 aa  69.7  0.00000000004  Enterobacter sp. 638  Bacteria  normal  0.946845  normal  0.64471 
 
 
-
 
NC_008782  Ajs_2046  short-chain dehydrogenase/reductase SDR  29.12 
 
 
263 aa  69.7  0.00000000005  Acidovorax sp. JS42  Bacteria  decreased coverage  0.00404736  normal 
 
 
-
 
NC_009428  Rsph17025_2866  short-chain dehydrogenase/reductase SDR  28.52 
 
 
243 aa  69.3  0.00000000006  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2700  short-chain dehydrogenase/reductase SDR  30.03 
 
 
268 aa  68.9  0.00000000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.657901 
 
 
-
 
NC_010725  Mpop_0321  short-chain dehydrogenase/reductase SDR  28.87 
 
 
254 aa  68.9  0.00000000007  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2858  3-oxoacyl-[acyl-carrier-protein] reductase  27.74 
 
 
246 aa  68.9  0.00000000008  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1241  short-chain dehydrogenase/reductase SDR  29.62 
 
 
260 aa  68.9  0.00000000008  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0407787  normal  0.415093 
 
 
-
 
NC_010531  Pnec_0235  short-chain dehydrogenase/reductase SDR  26.67 
 
 
244 aa  68.9  0.00000000008  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4317  short-chain dehydrogenase/reductase SDR  31.75 
 
 
234 aa  68.2  0.0000000001  Frankia sp. EAN1pec  Bacteria  normal  0.0991034  normal  0.658106 
 
 
-
 
NC_007973  Rmet_3057  3-oxoacyl-[acyl-carrier-protein] reductase  28 
 
 
246 aa  68.2  0.0000000001  Cupriavidus metallidurans CH34  Bacteria  normal  0.030998  normal 
 
 
-
 
NC_013172  Bfae_29820  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like  25.45 
 
 
261 aa  68.6  0.0000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4826  short-chain dehydrogenase/reductase SDR  30.65 
 
 
244 aa  68.2  0.0000000001  Nocardioides sp. JS614  Bacteria  normal  normal  0.806753 
 
 
-
 
NC_009954  Cmaq_1409  aldose dehydrogenase  27.59 
 
 
258 aa  67.8  0.0000000002  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
NC_010084  Bmul_0544  acetoacetyl-CoA reductase  27.27 
 
 
247 aa  67.4  0.0000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_1561  short chain dehydrogenase  30.53 
 
 
516 aa  67.4  0.0000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.636243  n/a   
 
 
-
 
NC_007925  RPC_3480  short-chain dehydrogenase/reductase SDR  27.59 
 
 
281 aa  67.4  0.0000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.223454  normal 
 
 
-
 
NC_008578  Acel_1849  short chain dehydrogenase  28.21 
 
 
255 aa  67.4  0.0000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.838313 
 
 
-
 
NC_013037  Dfer_1228  short-chain dehydrogenase/reductase SDR  27.76 
 
 
272 aa  67.8  0.0000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.178031  hitchhiker  0.00135629 
 
 
-
 
NC_009952  Dshi_0325  3-ketoacyl-(acyl-carrier-protein) reductase  28.36 
 
 
243 aa  67  0.0000000003  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.992211 
 
 
-
 
NC_010625  Bphy_6823  short-chain dehydrogenase/reductase SDR  28.52 
 
 
258 aa  67  0.0000000003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3707  short-chain dehydrogenase/reductase SDR  29.12 
 
 
261 aa  67.4  0.0000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.372057  n/a   
 
 
-
 
NC_010625  Bphy_6555  acetoacetyl-CoA reductase  26.89 
 
 
247 aa  67  0.0000000003  Burkholderia phymatum STM815  Bacteria  normal  normal  0.660753 
 
 
-
 
NC_008148  Rxyl_0346  short-chain dehydrogenase/reductase SDR  27.92 
 
 
256 aa  67  0.0000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0244456  n/a   
 
 
-
 
NC_008392  Bamb_6220  short-chain dehydrogenase/reductase SDR  28.32 
 
 
252 aa  67  0.0000000003  Burkholderia ambifaria AMMD  Bacteria  normal  0.621886  normal 
 
 
-
 
NC_011831  Cagg_2751  short-chain dehydrogenase/reductase SDR  26.81 
 
 
252 aa  67  0.0000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal 
 
 
-
 
NC_008688  Pden_4577  short chain dehydrogenase  26.62 
 
 
259 aa  67  0.0000000003  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.795837 
 
 
-
 
NC_014158  Tpau_3804  short-chain dehydrogenase/reductase SDR  32.35 
 
 
253 aa  67  0.0000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2477  short-chain dehydrogenase/reductase SDR  25.76 
 
 
236 aa  67  0.0000000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.433499  n/a   
 
 
-
 
NC_007348  Reut_B4557  Short-chain dehydrogenase/reductase SDR  28.32 
 
 
256 aa  66.6  0.0000000004  Ralstonia eutropha JMP134  Bacteria  normal  0.221009  n/a   
 
 
-
 
NC_007958  RPD_0355  short-chain dehydrogenase/reductase SDR  29.67 
 
 
263 aa  66.6  0.0000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  decreased coverage  0.00000760103 
 
 
-
 
NC_009832  Spro_2063  short-chain dehydrogenase/reductase SDR  26.5 
 
 
251 aa  66.6  0.0000000004  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_006684  CNB00370  fatty acid beta-oxidation-related protein, putative  27.93 
 
 
292 aa  66.2  0.0000000005  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.170907  n/a   
 
 
-
 
NC_009953  Sare_2830  short chain dehydrogenase  30.71 
 
 
247 aa  66.2  0.0000000005  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0192298 
 
 
-
 
NC_007348  Reut_B4376  Short-chain dehydrogenase/reductase SDR  26.57 
 
 
285 aa  66.2  0.0000000005  Ralstonia eutropha JMP134  Bacteria  normal  0.896027  n/a   
 
 
-
 
NC_009077  Mjls_4725  short-chain dehydrogenase/reductase SDR  28.83 
 
 
253 aa  66.2  0.0000000005  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_4047  3-oxoacyl-(acyl-carrier-protein) reductase  27.9 
 
 
249 aa  66.2  0.0000000005  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_4018  short-chain dehydrogenase/reductase SDR  26.69 
 
 
254 aa  66.2  0.0000000005  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7696  short-chain dehydrogenase/reductase SDR  28.57 
 
 
251 aa  66.2  0.0000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.984897  normal  0.462493 
 
 
-
 
NC_011726  PCC8801_1575  short chain dehydrogenase  26.55 
 
 
249 aa  66.2  0.0000000006  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008146  Mmcs_4345  short-chain dehydrogenase/reductase SDR  28.83 
 
 
253 aa  65.9  0.0000000006  Mycobacterium sp. MCS  Bacteria  normal  0.108758  n/a   
 
 
-
 
NC_009901  Spea_2114  3 alpha-hydroxysteroid dehydrogenase/carbonyl reductase  31.54 
 
 
259 aa  65.9  0.0000000006  Shewanella pealeana ATCC 700345  Bacteria  normal  0.138604  n/a   
 
 
-
 
NC_013131  Caci_1368  short chain dehydrogenase  31.66 
 
 
263 aa  65.9  0.0000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.694726 
 
 
-
 
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