| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3057 |
|---|
| Symbol | |
|---|
| ID | 4039885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3315065 |
|---|
| End bp | 3315805 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637978456 |
|---|
| Product | 3-oxoacyl-[acyl-carrier-protein] reductase |
|---|
| Protein accession | YP_585198 |
|---|
| Protein GI | 94311988 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.030998 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGC AGGGACGCGT AGCGATCATC ACCGGCGCCG CCGCCGGCAT CGGTTTTGCC
ACCGCCGAAC GTTTCGCCGC CGAAGGCGCG AAGCTCATCA TGTGCGATGT GCAGGAGGCC
CGCGTGCGCG AGGCCGCCGA GCGGCTGGCC GCCAAGGGCG CGCAGGTCGA GGCGCACAAG
GTCGACGTCA CGCGCCGCGA CGAGGTCGAT GCCATGGTGG CAGCCACGCT GGCCCGCCAC
GGTCGCATCG ATGTTCTCGT CAACAACGCC GGCATCACCA AGGACGCGCG CCTCGCCAAG
ATGACCGAGG CACAGTTCGA TGCGGTCATC GACGTCAACC TGAAGGGCGT GTTCAACTGC
TCACAGGCCG TGGCCAGCAT CATGTCCGAG CAGGGCAGCG GCGTGATCCT GAACGCATCG
AGCGTGGTTG GCCTGTATGG CAACTTCGGC CAGACCAATT ACGCGGCTTC CAAGTTCGGC
GTGATCGGCT TCACCAAGAC CTGGGCGCGC GAACTGGGTC CGAAGGGCGT GCGCGTGAAC
GCGGTATGCC CGGGCTTTGT CAATACCGAG ATCCTGCAGA CCGTGCCGGA GAAGGTGCTC
GACGGCATGA AGGAACATTG CTGGATGCGC CGCCTGGCCG AGCCGTCGGA GATCGCCGCG
ATCTACACGT TCCTGGCCAG CGACGACGCC AGCTACGTCA ACGGCACGAC GATCGAAGCC
AGCGGCGGCA TGTCGCTGTA A
|
|---|
| Protein sequence | MKLQGRVAII TGAAAGIGFA TAERFAAEGA KLIMCDVQEA RVREAAERLA AKGAQVEAHK
VDVTRRDEVD AMVAATLARH GRIDVLVNNA GITKDARLAK MTEAQFDAVI DVNLKGVFNC
SQAVASIMSE QGSGVILNAS SVVGLYGNFG QTNYAASKFG VIGFTKTWAR ELGPKGVRVN
AVCPGFVNTE ILQTVPEKVL DGMKEHCWMR RLAEPSEIAA IYTFLASDDA SYVNGTTIEA
SGGMSL
|
|---|
| |