Gene Rmet_3057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3057 
Symbol 
ID4039885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3315065 
End bp3315805 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content65% 
IMG OID637978456 
Product3-oxoacyl-[acyl-carrier-protein] reductase 
Protein accessionYP_585198 
Protein GI94311988 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.030998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGC AGGGACGCGT AGCGATCATC ACCGGCGCCG CCGCCGGCAT CGGTTTTGCC 
ACCGCCGAAC GTTTCGCCGC CGAAGGCGCG AAGCTCATCA TGTGCGATGT GCAGGAGGCC
CGCGTGCGCG AGGCCGCCGA GCGGCTGGCC GCCAAGGGCG CGCAGGTCGA GGCGCACAAG
GTCGACGTCA CGCGCCGCGA CGAGGTCGAT GCCATGGTGG CAGCCACGCT GGCCCGCCAC
GGTCGCATCG ATGTTCTCGT CAACAACGCC GGCATCACCA AGGACGCGCG CCTCGCCAAG
ATGACCGAGG CACAGTTCGA TGCGGTCATC GACGTCAACC TGAAGGGCGT GTTCAACTGC
TCACAGGCCG TGGCCAGCAT CATGTCCGAG CAGGGCAGCG GCGTGATCCT GAACGCATCG
AGCGTGGTTG GCCTGTATGG CAACTTCGGC CAGACCAATT ACGCGGCTTC CAAGTTCGGC
GTGATCGGCT TCACCAAGAC CTGGGCGCGC GAACTGGGTC CGAAGGGCGT GCGCGTGAAC
GCGGTATGCC CGGGCTTTGT CAATACCGAG ATCCTGCAGA CCGTGCCGGA GAAGGTGCTC
GACGGCATGA AGGAACATTG CTGGATGCGC CGCCTGGCCG AGCCGTCGGA GATCGCCGCG
ATCTACACGT TCCTGGCCAG CGACGACGCC AGCTACGTCA ACGGCACGAC GATCGAAGCC
AGCGGCGGCA TGTCGCTGTA A
 
Protein sequence
MKLQGRVAII TGAAAGIGFA TAERFAAEGA KLIMCDVQEA RVREAAERLA AKGAQVEAHK 
VDVTRRDEVD AMVAATLARH GRIDVLVNNA GITKDARLAK MTEAQFDAVI DVNLKGVFNC
SQAVASIMSE QGSGVILNAS SVVGLYGNFG QTNYAASKFG VIGFTKTWAR ELGPKGVRVN
AVCPGFVNTE ILQTVPEKVL DGMKEHCWMR RLAEPSEIAA IYTFLASDDA SYVNGTTIEA
SGGMSL