| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1228 |
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| Symbol | |
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| ID | 8224799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1457708 |
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| End bp | 1458526 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644929090 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003085642 |
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| Protein GI | 255035021 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.178031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00135629 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGATC TGAAGTTCAA AGATCAGGTC GTCATTGTGA CCGGATCAAG CTCCGGGATT
GGAAAAGCTT GTGCAGTGCA CTTTGGAAAC AACGGAGCGA ATGTCGTAGT CAATTACAGT
TCCAATGCGG AAGCCGGACA AGAGGTCGTC GACCAAATCA AGTCAAATGG CGGCAACGCC
ATTCTGGTAA AGGCCGACGT CAGCAAGGAA GATGAAGTAA AAGCGCTGTT TGCCGAAACA
GTGAACCAAT TCGGTCGGGT GGATGTGCTC GTAAGCAATG CGGGCCTGCA AAAGGACGCA
CCGTTCCTGG AAATGACATT GGAACAATGG CAAAAGGTGA TCGATGTCAA TCTCACCGGC
CAGTTTCTTG CCTGCCGCGA AGCCGCGAAG CAATTTATTG CTCAAAACCA GTCGGCTACG
GAAGTTACAC ACAGTGAACT CGCCATCGGA AAAATCATCC TGATGAGCTC CGTGCACGAT
GTGATTCCCT GGGCCGGTCA CGTCAACTAT GCCGCTTCTA AAGGTGGGAC GATGATGTTC
ATGAAATCCA TATCGCAGGA GCTCGCGCCC CACAAAATCC GCGTGAACTC GGTAAGTCCC
GGAGCGATCA AAACACCTAT TAATCAGGAC GTTTGGTCCG ATCCGGACAA ATACCAGAGC
CTTTTGCAAT TGATTCCTTA TAAACGGATC GGCACGTCGC AGGACGTAGC GAAGGCAGTT
GCCTGGCTGG CATCCGACGA TTCGGATTAC GTGAATGGCG AAACGTTATA TATCGACGGC
GGTATGACGC TCTATCCCGA ATTCGCCGAT AACGGCTAA
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| Protein sequence | MNDLKFKDQV VIVTGSSSGI GKACAVHFGN NGANVVVNYS SNAEAGQEVV DQIKSNGGNA
ILVKADVSKE DEVKALFAET VNQFGRVDVL VSNAGLQKDA PFLEMTLEQW QKVIDVNLTG
QFLACREAAK QFIAQNQSAT EVTHSELAIG KIILMSSVHD VIPWAGHVNY AASKGGTMMF
MKSISQELAP HKIRVNSVSP GAIKTPINQD VWSDPDKYQS LLQLIPYKRI GTSQDVAKAV
AWLASDDSDY VNGETLYIDG GMTLYPEFAD NG
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