59 homologs were found in PanDaTox collection
for query gene Dhaf_2798 on replicon NC_011830
Organism: Desulfitobacterium hafniense DCB-2



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013216  Dtox_1270  carbon-monoxide dehydrogenase, catalytic subunit  51.86 
 
 
673 aa  763    Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00748773  normal 
 
 
-
 
NC_011830  Dhaf_2798  carbon-monoxide dehydrogenase, catalytic subunit  100 
 
 
672 aa  1393    Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3780  carbon-monoxide dehydrogenase, catalytic subunit  52.44 
 
 
674 aa  761    Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.288316  normal 
 
 
-
 
NC_007644  Moth_1203  carbon-monoxide dehydrogenase, catalytic subunit  54.81 
 
 
674 aa  793    Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4498  carbon-monoxide dehydrogenase, catalytic subunit  49.05 
 
 
663 aa  625  1e-178  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.325797 
 
 
-
 
NC_011830  Dhaf_3792  carbon-monoxide dehydrogenase, catalytic subunit  47.7 
 
 
635 aa  621  1e-176  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.117932  n/a   
 
 
-
 
NC_011146  Gbem_0072  carbon-monoxide dehydrogenase, catalytic subunit  48.42 
 
 
635 aa  612  9.999999999999999e-175  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1427  carbon-monoxide dehydrogenase, catalytic subunit  46.84 
 
 
639 aa  598  1e-170  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0882  carbon-monoxide dehydrogenase, catalytic subunit  47 
 
 
635 aa  592  1e-168  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2327  carbon-monoxide dehydrogenase, catalytic subunit  44.88 
 
 
621 aa  512  1e-143  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00453727  normal  0.0261188 
 
 
-
 
NC_009483  Gura_0618  carbon-monoxide dehydrogenase, catalytic subunit  41.26 
 
 
641 aa  494  9.999999999999999e-139  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2098  carbon monoxide dehydrogenase subunit  41.18 
 
 
640 aa  494  9.999999999999999e-139  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0057  carbon-monoxide dehydrogenase, catalytic subunit  42.31 
 
 
645 aa  489  1e-137  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.612526  n/a   
 
 
-
 
NC_011832  Mpal_0842  carbon-monoxide dehydrogenase, catalytic subunit  41.86 
 
 
629 aa  483  1e-135  Methanosphaerula palustris E1-9c  Archaea  normal  0.183197  normal  0.106762 
 
 
-
 
NC_008553  Mthe_1341  carbon-monoxide dehydrogenase, catalytic subunit  43.75 
 
 
623 aa  478  1e-133  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_012560  Avin_04490  carbon-monoxide dehydrogenase, catalytic subunit  40.33 
 
 
632 aa  473  1e-132  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3028  carbon-monoxide dehydrogenase, catalytic subunit  42.04 
 
 
625 aa  469  1.0000000000000001e-131  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A3525  carbon monoxide dehydrogenase  41.1 
 
 
624 aa  469  1.0000000000000001e-131  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_1272  carbon-monoxide dehydrogenase, catalytic subunit  41.67 
 
 
628 aa  463  1e-129  Methanospirillum hungatei JF-1  Archaea  normal  0.142133  normal 
 
 
-
 
NC_013223  Dret_1234  carbon-monoxide dehydrogenase, catalytic subunit  41.34 
 
 
629 aa  465  1e-129  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0405701  normal  0.377093 
 
 
-
 
NC_011883  Ddes_0382  carbon-monoxide dehydrogenase, catalytic subunit  41.21 
 
 
631 aa  465  1e-129  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.72739  n/a   
 
 
-
 
NC_011769  DvMF_2233  carbon-monoxide dehydrogenase, catalytic subunit  40.99 
 
 
629 aa  462  9.999999999999999e-129  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_2875  carbon-monoxide dehydrogenase, catalytic subunit  40.83 
 
 
626 aa  456  1e-127  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.843098  normal 
 
 
-
 
NC_013173  Dbac_0934  carbon-monoxide dehydrogenase, catalytic subunit  40.58 
 
 
627 aa  455  1.0000000000000001e-126  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.502316  n/a   
 
 
-
 
NC_008751  Dvul_1133  carbon-monoxide dehydrogenase, catalytic subunit  40.89 
 
 
629 aa  447  1.0000000000000001e-124  Desulfovibrio vulgaris DP4  Bacteria  normal  0.394682  normal  0.139391 
 
 
-
 
NC_009943  Dole_3185  carbon-monoxide dehydrogenase, catalytic subunit  39.02 
 
 
679 aa  439  1e-121  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.579976  n/a   
 
 
-
 
NC_009712  Mboo_0884  carbon-monoxide dehydrogenase, catalytic subunit  38.72 
 
 
653 aa  432  1e-120  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.17634  normal  0.977834 
 
 
-
 
NC_013385  Adeg_0335  carbon-monoxide dehydrogenase, catalytic subunit  38.8 
 
 
642 aa  400  9.999999999999999e-111  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1972  carbon-monoxide dehydrogenase, catalytic subunit  35.91 
 
 
655 aa  367  1e-100  Moorella thermoacetica ATCC 39073  Bacteria  decreased coverage  0.00000154748  normal 
 
 
-
 
NC_010424  Daud_0870  carbon-monoxide dehydrogenase, catalytic subunit  36.64 
 
 
628 aa  367  1e-100  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.404437  n/a   
 
 
-
 
NC_009943  Dole_1461  carbon-monoxide dehydrogenase, catalytic subunit  36.78 
 
 
656 aa  368  1e-100  Desulfococcus oleovorans Hxd3  Bacteria  unclonable  0.0000000668721  n/a   
 
 
-
 
NC_008554  Sfum_2566  carbon-monoxide dehydrogenase, catalytic subunit  34.73 
 
 
663 aa  351  2e-95  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1736  carbon-monoxide dehydrogenase, catalytic subunit  33.23 
 
 
666 aa  351  2e-95  Geobacter bemidjiensis Bem  Bacteria  normal  0.306274  n/a   
 
 
-
 
NC_011898  Ccel_0438  carbon-monoxide dehydrogenase, catalytic subunit  32.33 
 
 
663 aa  343  4e-93  Clostridium cellulolyticum H10  Bacteria  unclonable  0.000000530778  n/a   
 
 
-
 
NC_007517  Gmet_1902  carbon-monoxide dehydrogenase, catalytic subunit  33.65 
 
 
669 aa  337  3.9999999999999995e-91  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000268472  hitchhiker  0.000000000000110792 
 
 
-
 
NC_009012  Cthe_2801  carbon-monoxide dehydrogenase, catalytic subunit  32.24 
 
 
670 aa  329  1.0000000000000001e-88  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.00000137875  n/a   
 
 
-
 
NC_009802  CCC13826_0236  carbon-monoxide dehydrogenase, catalytic subunit  30.63 
 
 
679 aa  324  3e-87  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1131  carbon-monoxide dehydrogenase, catalytic subunit  31.65 
 
 
676 aa  321  3e-86  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.000338326  n/a   
 
 
-
 
NC_010718  Nther_0860  carbon-monoxide dehydrogenase, catalytic subunit  29.92 
 
 
695 aa  297  4e-79  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.199727  normal  0.922779 
 
 
-
 
NC_013216  Dtox_2933  carbon-monoxide dehydrogenase, catalytic subunit  29.95 
 
 
623 aa  288  2e-76  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00000257353  normal 
 
 
-
 
NC_011830  Dhaf_1166  carbon-monoxide dehydrogenase, catalytic subunit  32.19 
 
 
637 aa  283  6.000000000000001e-75  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0652  carbon-monoxide dehydrogenase, catalytic subunit  28.66 
 
 
707 aa  270  5.9999999999999995e-71  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00052858  n/a   
 
 
-
 
NC_011898  Ccel_2918  carbon-monoxide dehydrogenase, catalytic subunit  27.84 
 
 
710 aa  268  2.9999999999999995e-70  Clostridium cellulolyticum H10  Bacteria  normal  0.0596914  n/a   
 
 
-
 
NC_007355  Mbar_A3717  carbon-monoxide dehydrogenase, catalytic subunit  29.46 
 
 
634 aa  262  1e-68  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_008639  Cpha266_0149  carbon-monoxide dehydrogenase (acceptor)  28.64 
 
 
680 aa  260  6e-68  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0888  carbon-monoxide dehydrogenase, catalytic subunit  28.62 
 
 
629 aa  249  1e-64  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.186953  n/a   
 
 
-
 
NC_008553  Mthe_1216  carbon-monoxide dehydrogenase, catalytic subunit  27.57 
 
 
648 aa  229  1e-58  Methanosaeta thermophila PT  Archaea  normal  0.655192  n/a   
 
 
-
 
NC_008553  Mthe_0292  acetyl-CoA decarbonylase/synthase complex subunit alpha  20.25 
 
 
805 aa  54.3  0.000008  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0227  acetyl-CoA decarbonylase/synthase complex subunit alpha  22.97 
 
 
778 aa  52.4  0.00003  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009635  Maeo_0475  acetyl-CoA decarbonylase/synthase complex subunit alpha  23.21 
 
 
768 aa  50.8  0.00007  Methanococcus aeolicus Nankai-3  Archaea  normal  0.908557  n/a   
 
 
-
 
NC_009135  MmarC5_0805  acetyl-CoA decarbonylase/synthase complex subunit alpha  22.64 
 
 
778 aa  50.8  0.00008  Methanococcus maripaludis C5  Archaea  normal  0.471946  n/a   
 
 
-
 
NC_009975  MmarC6_1673  acetyl-CoA decarbonylase/synthase complex subunit alpha  21.28 
 
 
778 aa  50.1  0.0001  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_0690  acetyl-CoA decarbonylase/synthase complex subunit alpha  23.43 
 
 
787 aa  50.1  0.0002  Methanospirillum hungatei JF-1  Archaea  normal  0.676741  normal  0.475894 
 
 
-
 
NC_007514  Cag_1490  hydroxylamine reductase  22.98 
 
 
540 aa  48.9  0.0003  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000660036  n/a   
 
 
-
 
NC_009635  Maeo_1174  acetyl-CoA decarbonylase/synthase complex subunit alpha  23.61 
 
 
786 aa  48.1  0.0005  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_007955  Mbur_0858  acetyl-CoA decarbonylase/synthase complex subunit alpha  22.33 
 
 
802 aa  47.8  0.0007  Methanococcoides burtonii DSM 6242  Archaea  unclonable  0.00000000764937  n/a   
 
 
-
 
NC_007355  Mbar_A0204  acetyl-CoA decarbonylase/synthase complex subunit alpha  23.68 
 
 
806 aa  47.4  0.0008  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.00731411  normal 
 
 
-
 
NC_009634  Mevan_0311  acetyl-CoA decarbonylase/synthase complex subunit alpha  25.34 
 
 
779 aa  47.4  0.001  Methanococcus vannielii SB  Archaea  normal  0.435383  n/a   
 
 
-
 
NC_007955  Mbur_1053  hydroxylamine reductase  21.46 
 
 
539 aa  47  0.001  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>