More than 300 homologs were found in PanDaTox collection
for query gene Cphy_3407 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_3407  binding-protein-dependent transport systems inner membrane component  100 
 
 
281 aa  566  1e-160  Clostridium phytofermentans ISDg  Bacteria  normal  0.0224694  n/a   
 
 
-
 
NC_013411  GYMC61_2714  binding-protein-dependent transport systems inner membrane component  38.97 
 
 
288 aa  213  3.9999999999999995e-54  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_0202  binding-protein-dependent transport systems inner membrane component  36.88 
 
 
284 aa  210  2e-53  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_13120  binding-protein-dependent transport systems inner membrane component  33.82 
 
 
281 aa  201  9.999999999999999e-51  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1135  binding-protein-dependent transport systems inner membrane component  38.04 
 
 
276 aa  195  7e-49  Clostridium cellulolyticum H10  Bacteria  normal  0.776984  n/a   
 
 
-
 
NC_010001  Cphy_1531  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
275 aa  191  1e-47  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2694  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
279 aa  184  2.0000000000000003e-45  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1027  binding-protein-dependent transport systems inner membrane component  37.07 
 
 
279 aa  179  5.999999999999999e-44  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.006727  n/a   
 
 
-
 
NC_008786  Veis_0946  binding-protein-dependent transport systems inner membrane component  34.4 
 
 
281 aa  173  2.9999999999999996e-42  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0616  binding-protein-dependent transport systems inner membrane component  38.72 
 
 
275 aa  171  2e-41  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4664  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
294 aa  171  2e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.829969 
 
 
-
 
NC_010320  Teth514_1117  binding-protein-dependent transport systems inner membrane component  34.91 
 
 
275 aa  170  2e-41  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4749  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
294 aa  170  3e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.377096 
 
 
-
 
NC_008148  Rxyl_0623  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
285 aa  167  2.9999999999999998e-40  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.587185  n/a   
 
 
-
 
NC_013526  Tter_2001  binding-protein-dependent transport systems inner membrane component  34.26 
 
 
284 aa  162  5.0000000000000005e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.757856  n/a   
 
 
-
 
NC_013526  Tter_2216  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
301 aa  158  8e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1729  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
275 aa  157  1e-37  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008261  CPF_1115  sugar ABC transporter, permease protein  34.17 
 
 
285 aa  152  7e-36  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0469179  n/a   
 
 
-
 
NC_013526  Tter_2657  binding-protein-dependent transport systems inner membrane component  34.06 
 
 
283 aa  151  1e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0061  binding-protein-dependent transport systems inner membrane component  29.29 
 
 
297 aa  151  1e-35  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_1945  binding-protein-dependent transport systems inner membrane component  32.96 
 
 
271 aa  149  3e-35  Arthrobacter sp. FB24  Bacteria  normal  0.232263  n/a   
 
 
-
 
NC_010320  Teth514_1093  binding-protein-dependent transport systems inner membrane component  36.4 
 
 
270 aa  150  3e-35  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_4035  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
275 aa  149  4e-35  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0542  transmembrane transport protein  32.75 
 
 
293 aa  149  7e-35  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0558  ABC transporter, permease protein  32.39 
 
 
293 aa  148  9e-35  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0029  binding-protein-dependent transport systems inner membrane component  29.14 
 
 
283 aa  148  1.0000000000000001e-34  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000511748  n/a   
 
 
-
 
NC_011898  Ccel_1000  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
279 aa  147  2.0000000000000003e-34  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3860  binding-protein-dependent transport systems inner membrane component  30.63 
 
 
291 aa  147  2.0000000000000003e-34  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2701  binding-protein-dependent transport systems inner membrane component  30.32 
 
 
275 aa  146  3e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0563997  n/a   
 
 
-
 
NC_009429  Rsph17025_3649  binding-protein-dependent transport systems inner membrane component  30.63 
 
 
281 aa  145  9e-34  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0384109 
 
 
-
 
NC_008541  Arth_3685  binding-protein-dependent transport systems inner membrane component  31.23 
 
 
299 aa  144  2e-33  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_3244  binding-protein-dependent transport systems inner membrane component  36.2 
 
 
279 aa  143  3e-33  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20610  binding-protein-dependent transport systems inner membrane component  31.48 
 
 
273 aa  143  3e-33  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_0812  ABC-type maltose transport system, permease component  37.16 
 
 
215 aa  142  4e-33  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2317  binding-protein-dependent transport systems inner membrane component  30.07 
 
 
299 aa  142  5e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1989  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
284 aa  142  6e-33  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.951557  n/a   
 
 
-
 
NC_013530  Xcel_2536  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
306 aa  142  7e-33  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.250656  n/a   
 
 
-
 
NC_011899  Hore_09510  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
290 aa  142  8e-33  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000000548355  n/a   
 
 
-
 
NC_004116  SAG0036  sugar ABC transporter, permease protein  32.49 
 
 
276 aa  141  9.999999999999999e-33  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.385725  n/a   
 
 
-
 
NC_013595  Sros_7693  putative transmembrane permease component of ABC transporter  29.82 
 
 
286 aa  141  9.999999999999999e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.673988 
 
 
-
 
NC_013739  Cwoe_5439  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
272 aa  141  9.999999999999999e-33  Conexibacter woesei DSM 14684  Bacteria  normal  0.691915  normal 
 
 
-
 
NC_007488  RSP_3943  ABC sugar transporter, inner membrane subunit  29.89 
 
 
281 aa  140  1.9999999999999998e-32  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0114669  n/a   
 
 
-
 
NC_013595  Sros_0294  ABC sugar transporter, inner membrane subunit  30.94 
 
 
278 aa  140  3e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3677  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
304 aa  140  3e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.842824 
 
 
-
 
NC_012850  Rleg_1868  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
282 aa  140  3e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.766168 
 
 
-
 
NC_011899  Hore_04600  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
277 aa  139  3.9999999999999997e-32  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0497  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
306 aa  139  3.9999999999999997e-32  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000825086 
 
 
-
 
NC_013739  Cwoe_4452  binding-protein-dependent transport systems inner membrane component  31.5 
 
 
274 aa  139  4.999999999999999e-32  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3806  binding-protein-dependent transport systems inner membrane component  29.23 
 
 
300 aa  139  4.999999999999999e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6792  binding-protein-dependent transport systems inner membrane component  28.06 
 
 
285 aa  139  6e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1818  binding-protein-dependent transport systems inner membrane component  29.86 
 
 
279 aa  139  7e-32  Thermosipho melanesiensis BI429  Bacteria  normal  0.675174  n/a   
 
 
-
 
NC_009667  Oant_0352  binding-protein-dependent transport systems inner membrane component  28.74 
 
 
277 aa  139  7e-32  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0088  binding-protein-dependent transport systems inner membrane component  31.37 
 
 
271 aa  138  7.999999999999999e-32  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3327  binding-protein-dependent transport systems inner membrane component  30.36 
 
 
278 aa  138  1e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_4081  binding-protein-dependent transport systems inner membrane component  32.09 
 
 
275 aa  138  1e-31  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4881  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
295 aa  138  1e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.48115  normal 
 
 
-
 
NC_012034  Athe_2079  binding-protein-dependent transport systems inner membrane component  29.29 
 
 
280 aa  137  1e-31  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.697078  n/a   
 
 
-
 
NC_009486  Tpet_0956  binding-protein-dependent transport systems inner membrane component  29.6 
 
 
278 aa  138  1e-31  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2231  binding-protein-dependent transport systems inner membrane component  29.79 
 
 
297 aa  138  1e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.807172 
 
 
-
 
NC_013159  Svir_23410  carbohydrate ABC transporter membrane protein  29.58 
 
 
276 aa  138  1e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.828471  normal 
 
 
-
 
NC_010483  TRQ2_0972  binding-protein-dependent transport systems inner membrane component  29.6 
 
 
278 aa  138  1e-31  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00136246  n/a   
 
 
-
 
NC_011369  Rleg2_1687  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
282 aa  137  2e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.437147  normal 
 
 
-
 
NC_010001  Cphy_3400  binding-protein-dependent transport systems inner membrane component  27.5 
 
 
283 aa  137  2e-31  Clostridium phytofermentans ISDg  Bacteria  normal  0.372936  n/a   
 
 
-
 
NC_013172  Bfae_29710  carbohydrate ABC transporter membrane protein  32.83 
 
 
304 aa  137  2e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  0.942295  n/a   
 
 
-
 
NC_013947  Snas_1043  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
273 aa  136  3.0000000000000003e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  decreased coverage  0.00118636  normal  0.712976 
 
 
-
 
NC_011886  Achl_2899  binding-protein-dependent transport systems inner membrane component  31.79 
 
 
316 aa  137  3.0000000000000003e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009718  Fnod_0448  binding-protein-dependent transport systems inner membrane component  32.01 
 
 
281 aa  137  3.0000000000000003e-31  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5669  binding-protein-dependent transport systems inner membrane component  27.45 
 
 
275 aa  136  3.0000000000000003e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4986  binding-protein-dependent transport systems inner membrane component  28.21 
 
 
301 aa  136  4e-31  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00963253  hitchhiker  0.006941 
 
 
-
 
NC_013595  Sros_1500  binding-protein-dependent transport systems inner membrane component  28.83 
 
 
293 aa  136  4e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.347509  normal  0.943286 
 
 
-
 
NC_014210  Ndas_3334  binding-protein-dependent transport systems inner membrane component  29.3 
 
 
299 aa  135  5e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008528  OEOE_0255  ABC-type maltose transport system, permease component  29.6 
 
 
276 aa  135  6.0000000000000005e-31  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0050  binding-protein-dependent transport systems inner membrane component  32.5 
 
 
305 aa  135  6.0000000000000005e-31  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2918  binding-protein-dependent transport systems inner membrane component  30.3 
 
 
290 aa  135  7.000000000000001e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  0.787566  n/a   
 
 
-
 
NC_012669  Bcav_1682  binding-protein-dependent transport systems inner membrane component  27.54 
 
 
275 aa  135  7.000000000000001e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.299262  normal 
 
 
-
 
NC_009667  Oant_0311  binding-protein-dependent transport systems inner membrane component  31.66 
 
 
292 aa  135  8e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.466995  n/a   
 
 
-
 
NC_009674  Bcer98_2712  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
280 aa  135  8e-31  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0142208  n/a   
 
 
-
 
NC_009832  Spro_2524  binding-protein-dependent transport systems inner membrane component  30.59 
 
 
281 aa  135  8e-31  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_05240  carbohydrate ABC transporter membrane protein  30.83 
 
 
312 aa  135  8e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3249  binding-protein-dependent transporter inner membrane component  31.62 
 
 
284 aa  135  9e-31  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3773  binding-protein-dependent transport systems inner membrane component  29.82 
 
 
279 aa  135  9e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.468941  normal 
 
 
-
 
NC_013093  Amir_0401  binding-protein-dependent transport systems inner membrane component  28.52 
 
 
273 aa  135  9e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3428  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
280 aa  134  9.999999999999999e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_3839  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
280 aa  134  9.999999999999999e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.334457  n/a   
 
 
-
 
NC_009620  Smed_4015  binding-protein-dependent transport systems inner membrane component  29.66 
 
 
278 aa  134  9.999999999999999e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0067  binding-protein-dependent transporter inner membrane component  30.32 
 
 
295 aa  134  9.999999999999999e-31  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_4062  maltosaccharide ABC transporter, permease protein  33.81 
 
 
280 aa  134  1.9999999999999998e-30  Bacillus cereus ATCC 10987  Bacteria  normal  0.686146  n/a   
 
 
-
 
NC_013521  Sked_31520  carbohydrate ABC transporter membrane protein  33.08 
 
 
303 aa  134  1.9999999999999998e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.424225  normal  0.830973 
 
 
-
 
NC_005945  BAS3920  maltosaccharide ABC transporter permease  33.81 
 
 
280 aa  134  1.9999999999999998e-30  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3752  maltosaccharide ABC transporter, permease  33.81 
 
 
280 aa  134  1.9999999999999998e-30  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.109892  n/a   
 
 
-
 
NC_006274  BCZK3768  maltosaccharide ABC transporter, permease  33.81 
 
 
280 aa  134  1.9999999999999998e-30  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_1044  binding-protein-dependent transport systems inner membrane component  32.83 
 
 
277 aa  134  1.9999999999999998e-30  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2040  binding-protein-dependent transport systems inner membrane component  30.42 
 
 
305 aa  134  1.9999999999999998e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00998336  n/a   
 
 
-
 
NC_011772  BCG9842_B1122  maltosaccharide ABC transporter, permease protein  32.62 
 
 
280 aa  134  1.9999999999999998e-30  Bacillus cereus G9842  Bacteria  normal  0.331938  normal 
 
 
-
 
NC_013739  Cwoe_3981  binding-protein-dependent transport systems inner membrane component  26.34 
 
 
274 aa  134  1.9999999999999998e-30  Conexibacter woesei DSM 14684  Bacteria  normal  0.270796  normal 
 
 
-
 
NC_012034  Athe_2308  binding-protein-dependent transport systems inner membrane component  31.52 
 
 
283 aa  134  1.9999999999999998e-30  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000390677  n/a   
 
 
-
 
NC_011773  BCAH820_4030  maltosaccharide ABC transporter, permease protein  33.81 
 
 
280 aa  134  1.9999999999999998e-30  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_3341  putative sugar ABC transporter, permease protein  28.14 
 
 
292 aa  134  1.9999999999999998e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.22127  normal  0.118781 
 
 
-
 
NC_011725  BCB4264_A4117  maltosaccharide ABC transporter, permease protein  33.81 
 
 
280 aa  134  1.9999999999999998e-30  Bacillus cereus B4264  Bacteria  normal  0.222896  n/a   
 
 
-
 
NC_013411  GYMC61_2729  binding-protein-dependent transport systems inner membrane component  30.11 
 
 
293 aa  134  1.9999999999999998e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
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