| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_23410 |
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| Symbol | |
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| ID | 8387665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2529252 |
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| End bp | 2530082 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644976392 |
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| Product | carbohydrate ABC transporter membrane protein |
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| Protein accession | YP_003134174 |
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| Protein GI | 257056342 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.828471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGA AGGTGCGGAC GCGACCCAAC GTCCTGGGCG GACTGGCCGG ATTCGCGTGG
TTGCTCGTGG TGCTCGTGCC GGTCTACTAC GTCGTGATCA CGAGTTTGCG GGACCAGGAG
GGTTTCTTCT CCTCGAATCC GCTCGCCCCA CCCGCTGACC CCACGTTGGA CAGTTACCGA
CTGGTGCTGG AGAACGATTT CCTGCGCTAT CTCGGAAACA GCGTGGTGGT GACACTGGCG
ACGGTGCTGA TCACCGTGAG TGTGTCACTG TTGGCGGCCT ACTACGTGGT GCGGGGCGGT
GGCAGGCTGG CCCGGCTCAC CTACCGTTCC TTCCTGTTGG GTCTGGCCAT CCCGTTGCAG
GCCACGATCA TCCCGGTCTA CTACCTCATC ACGCAGATCC AGCTCTACGA CACCTTGTGG
GCGATCATCC TGCCGTCCGC CGCGTTCGCC ATCCCCCTGT CGGTGGTCAT CCTGGCGAAC
TTCCTGCGCG ATGTCCCGAA CGAACTGTTC GAGTCCATGC GCATGGACGG GGCGGGGCAC
TGGCGCATGG TGTGGAGTCT GGTGCTGCCG CTCACCCGGC CCGCGGTGGT CACCGTCGCG
GTGTACGACG CGCTGCAGGT GTGGAACGGA TTCCTGTTCC CGCTGATCCT CACGCAGAGC
CCGGACCAGC GGGTGCTGCC CTTGGCGCTG TGGAGTTTCC AAGGTCAGTT CACCGTCAAC
ATCCCCGCTG TGCTGGCGGC GGTGGTGTTG TCCACGTTGC CCGTGCTCGC GCTCTACATC
CTCGGCAGGC GGCAGTTGAT CGGAGGGCTC ACGGCCGGCT TCGGTCGGTG A
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| Protein sequence | MTAKVRTRPN VLGGLAGFAW LLVVLVPVYY VVITSLRDQE GFFSSNPLAP PADPTLDSYR
LVLENDFLRY LGNSVVVTLA TVLITVSVSL LAAYYVVRGG GRLARLTYRS FLLGLAIPLQ
ATIIPVYYLI TQIQLYDTLW AIILPSAAFA IPLSVVILAN FLRDVPNELF ESMRMDGAGH
WRMVWSLVLP LTRPAVVTVA VYDALQVWNG FLFPLILTQS PDQRVLPLAL WSFQGQFTVN
IPAVLAAVVL STLPVLALYI LGRRQLIGGL TAGFGR
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