Gene Athe_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2079 
Symbol 
ID7408788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2200044 
End bp2200886 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content34% 
IMG OID643716446 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002573929 
Protein GI222530047 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.697078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAAGAA CAAAGACAAT GAAAGCATTA TTGTTTCATC TGCTAACAAT TCTATTTGGT 
TACATAATGC TGTATCCACT TCTTTGGATG TTTTTCAGTT CCTTCAAAGA AAATAGTGAA
ATTTTTCTAA ATGCGCACGA ATTGCTACCC AAAAAGTGGC TTTTCAAAAA TTATATTGAT
GGATGGAGAG GTTTTGCGGG ATACCCATTT TCAGTTTTTT TTAAAAATTC ATTTATTGTT
ACTATTATTG GTACTGTTGG TGCTGTCATT TCCTCAGCTA TTGTAGCTTA TGGTTTTGCA
AGATGTAAGT TCAAAGGCAA AGGATTTTGG TTTGGTTGTA TGATTATAAC TATGCTTTTA
CCATATCAGG TTGTTATGAT TCCGCAATAC ATCATGTTTC AAAAGATGGG ATGGGTAAAT
ACGTTCAAGC CTTTACTTGT TCCAGCTTTT TTGGGTCAGC CATTTTTTAT CTTTTTAATG
ATTCAATTTA TAAGAGGAAT TCCAAACGAA TTAGATGAAG CGGCTAAAAT TGATGGTTGT
AGTAAATATT CAATTTTTAC AAGAATTATT TTGCCATTAA TTTCTCCGGC TTTAATTACA
TCAGCAATCT TTTCATTTTT GTGGCGTTGG GATGACTTTT TAGGGCCTCT TTTGTACCTC
AGCAAACCTG AGTTGTATAC AGTATCTTTA GGGTTGAGAA TGTTCTCTGA CCCGACAGCA
GTTTCTAACT GGGGAGCTGC CTTTGCTATG GCAACATTAT CGCTCGTTCC CTCATTTATA
ATATTTATAT TCTTCCAACG CTATCTAGTG GAAGGAATTG TTACTACAGG TTTAAAGGGT
TAA
 
Protein sequence
MRRTKTMKAL LFHLLTILFG YIMLYPLLWM FFSSFKENSE IFLNAHELLP KKWLFKNYID 
GWRGFAGYPF SVFFKNSFIV TIIGTVGAVI SSAIVAYGFA RCKFKGKGFW FGCMIITMLL
PYQVVMIPQY IMFQKMGWVN TFKPLLVPAF LGQPFFIFLM IQFIRGIPNE LDEAAKIDGC
SKYSIFTRII LPLISPALIT SAIFSFLWRW DDFLGPLLYL SKPELYTVSL GLRMFSDPTA
VSNWGAAFAM ATLSLVPSFI IFIFFQRYLV EGIVTTGLKG