| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2536 |
|---|
| Symbol | |
|---|
| ID | 8650079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 2772692 |
|---|
| End bp | 2773612 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003327109 |
|---|
| Protein GI | 269957320 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.250656 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACGA CGACACTCCC TGGCCCCGAC CTCGGCCAGC GCATCACCGA GCTGGCCGCC
AGGTCACCCG AGGGCCGGCG CCGCCGGCTG TGGCGGGGAC GCACCGGCTC CGTGATCCGC
CACACGCTGA TGATCGTGGC CTGCGTGGTG ATGATCTACC CGCTGCTGTG GCTGCTGGGC
TCCTCGTTCA AGCCCACGGA GGCGATCTTC CGCAACCTGG CGATCCTGCC GGGCGAGTGG
GACTGGTCCA ACTACAACAC CGGCTGGAAC TCGCTGACCT TCCAGTTCGG CCGGTACATG
CTCAACTCGC TCGCCATCGT CGGCGGGTCG CTGCTGGGAA ACCTGGTCAG CTGCTCGATG
GCCGCCTACG CGTTCGCCCG CCTGCAGTTC CGGGGCCGGC GCATCTGGTT CGCGATCATG
CTCCTGACGA TCATGCTGCC GATCCACGTG GTGATCGTGC CGCAGTACAT CATGTTCCGG
GAGCTCGACC TGGTGAACAC GTTCTGGCCG CTCATCATCC CGAAGCTGCT GGCCACCGAC
GCGTTCTTCA TCTTCCTCAT GGTCCAGTTC TTCCGCGGCA TCCCGCGCGA GCTGGAGGAG
GCCGCCCGCC TCGACGGCTG CGGCCACGCC CGCATCTTCC TGCGTGTGAT GCTGCCGCTG
GCCGTCCCCG CCCTGGCCAC CACCGCGATC TTCACGTTCA TCTGGACGTG GAACGACTTC
TTCAGCCAGC TCATCTTCCT CACCTCCGAG GAGGTCAAGA CGGCGCCGGT CGCGCTGCGG
ATGTTCCTCG ACTCCTCGGC CGGCTCCAAC TGGGGGCCGA TGTTCGCGAT GTCCATCGTG
ACCATCGTCC CGATCTTCCT GGTCTTCCTG TTCGGGCAGA AGTACCTCGT CCGAGGCATC
GCCACGACCG GGATCAAGTA G
|
|---|
| Protein sequence | MSTTTLPGPD LGQRITELAA RSPEGRRRRL WRGRTGSVIR HTLMIVACVV MIYPLLWLLG
SSFKPTEAIF RNLAILPGEW DWSNYNTGWN SLTFQFGRYM LNSLAIVGGS LLGNLVSCSM
AAYAFARLQF RGRRIWFAIM LLTIMLPIHV VIVPQYIMFR ELDLVNTFWP LIIPKLLATD
AFFIFLMVQF FRGIPRELEE AARLDGCGHA RIFLRVMLPL AVPALATTAI FTFIWTWNDF
FSQLIFLTSE EVKTAPVALR MFLDSSAGSN WGPMFAMSIV TIVPIFLVFL FGQKYLVRGI
ATTGIK
|
|---|
| |