38 homologs were found in PanDaTox collection
for query gene Bphyt_6720 on replicon NC_010676
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010676  Bphyt_6720  hypothetical protein  100 
 
 
264 aa  544  1e-154  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3035  hypothetical protein  81.06 
 
 
264 aa  456  1e-127  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.000133593  unclonable  0.00000211782 
 
 
-
 
NC_007908  Rfer_3251  hypothetical protein  76.83 
 
 
264 aa  425  1e-118  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3795  hypothetical protein  81.82 
 
 
267 aa  416  9.999999999999999e-116  Burkholderia phymatum STM815  Bacteria  normal  0.755435  normal 
 
 
-
 
NC_007298  Daro_3976  hypothetical protein  72.31 
 
 
260 aa  403  1e-111  Dechloromonas aromatica RCB  Bacteria  normal  0.834147  normal 
 
 
-
 
NC_007963  Csal_3298  extracellular solute-binding protein  23.81 
 
 
254 aa  56.6  0.0000004  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3045  extracellular solute-binding protein  24.2 
 
 
252 aa  54.7  0.000001  Marinobacter aquaeolei VT8  Bacteria  normal  0.29813  n/a   
 
 
-
 
NC_013223  Dret_2029  extracellular solute-binding protein family 3  26.41 
 
 
275 aa  54.3  0.000002  Desulfohalobium retbaense DSM 5692  Bacteria  hitchhiker  0.00497658  hitchhiker  0.00148627 
 
 
-
 
NC_007908  Rfer_3807  extracellular solute-binding protein  22.93 
 
 
255 aa  49.7  0.00005  Rhodoferax ferrireducens T118  Bacteria  normal  0.0339434  n/a   
 
 
-
 
NC_011769  DvMF_2787  extracellular solute-binding protein family 3  25.93 
 
 
275 aa  49.3  0.00007  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010501  PputW619_4928  extracellular solute-binding protein  25.24 
 
 
250 aa  46.6  0.0004  Pseudomonas putida W619  Bacteria  normal  0.0454768  hitchhiker  0.0000000841601 
 
 
-
 
NC_009674  Bcer98_2849  extracellular solute-binding protein  23.81 
 
 
261 aa  46.6  0.0004  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00000542084  n/a   
 
 
-
 
NC_008262  CPR_0567  amino acid ABC transporter  27.48 
 
 
278 aa  45.4  0.0008  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1454  amino acid ABC transporter periplasmic protein  24.67 
 
 
265 aa  45.8  0.0008  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00353635  n/a   
 
 
-
 
NC_008261  CPF_0581  amino acid ABC transporter, amino acid-binding protein  27.48 
 
 
278 aa  45.4  0.0009  Clostridium perfringens ATCC 13124  Bacteria  normal  0.143423  n/a   
 
 
-
 
NC_007948  Bpro_2725  extracellular solute-binding protein  22.22 
 
 
255 aa  45.4  0.001  Polaromonas sp. JS666  Bacteria  normal  normal  0.377172 
 
 
-
 
NC_007519  Dde_0395  extracellular solute-binding protein  23.22 
 
 
267 aa  45.1  0.001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1231  extracellular solute-binding protein  21.5 
 
 
285 aa  43.9  0.002  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000126239  n/a   
 
 
-
 
NC_008751  Dvul_0247  extracellular solute-binding protein  20.15 
 
 
258 aa  44.7  0.002  Desulfovibrio vulgaris DP4  Bacteria  unclonable  0.0000000342463  normal 
 
 
-
 
NC_008532  STER_1455  amino acid ABC transporter periplasmic protein  27.38 
 
 
276 aa  43.5  0.003  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0000239011  n/a   
 
 
-
 
NC_005945  BAS4059  amino acid ABC transporter amino acid-binding protein  23.22 
 
 
259 aa  43.9  0.003  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000000988465  n/a   
 
 
-
 
NC_013171  Apre_0489  polar amino acid ABC transporter, inner membrane subunit  22.9 
 
 
490 aa  43.9  0.003  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_5123  extracellular solute-binding protein family 3  23.94 
 
 
252 aa  43.9  0.003  Variovorax paradoxus S110  Bacteria  normal  0.815904  n/a   
 
 
-
 
NC_011773  BCAH820_4174  amino acid ABC transporter, amino acid-binding protein  23.22 
 
 
259 aa  43.9  0.003  Bacillus cereus AH820  Bacteria  n/a    normal  0.0433211 
 
 
-
 
NC_005957  BT9727_3898  amino acid ABC transporter, amino acid-binding protein  23.22 
 
 
259 aa  43.9  0.003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  unclonable  1.3817799999999998e-20  n/a   
 
 
-
 
NC_006274  BCZK3905  amino acid ABC transporter, amino acid-binding protein  23.22 
 
 
259 aa  43.9  0.003  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000000878527  n/a   
 
 
-
 
NC_007530  GBAA_4376  amino acid ABC transporter amino acid-binding protein  23.22 
 
 
259 aa  43.9  0.003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  unclonable  0.00000000000139221  n/a   
 
 
-
 
NC_009665  Shew185_1275  extracellular solute-binding protein  21.5 
 
 
285 aa  43.9  0.003  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000731969  n/a   
 
 
-
 
NC_008346  Swol_0316  extracellular solute-binding protein  25.44 
 
 
255 aa  43.1  0.004  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.000000382447  n/a   
 
 
-
 
NC_013165  Shel_03950  periplasmic component of amino acid ABC-type transporter/signal transduction system  32.29 
 
 
364 aa  43.5  0.004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.72321  normal  0.568441 
 
 
-
 
NC_011663  Sbal223_3082  extracellular solute-binding protein family 3  21.03 
 
 
285 aa  43.1  0.005  Shewanella baltica OS223  Bacteria  hitchhiker  0.00109919  hitchhiker  0.00184496 
 
 
-
 
NC_009997  Sbal195_1308  extracellular solute-binding protein  21.03 
 
 
285 aa  43.1  0.005  Shewanella baltica OS195  Bacteria  normal  0.178396  normal  0.999326 
 
 
-
 
NC_012793  GWCH70_2291  extracellular solute-binding protein family 3  25.18 
 
 
260 aa  43.1  0.005  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.00000000299609  n/a   
 
 
-
 
NC_003909  BCE_4225  amino acid ABC transporter, amino acid-binding protein  22.75 
 
 
259 aa  42.7  0.006  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00000103966  n/a   
 
 
-
 
NC_011772  BCG9842_B0971  amino acid ABC transporter, amino acid-binding protein  22.75 
 
 
259 aa  42.4  0.007  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000530479  normal 
 
 
-
 
NC_007492  Pfl01_0311  extracellular solute-binding protein  26.09 
 
 
248 aa  42.4  0.008  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.00127977  normal 
 
 
-
 
NC_011658  BCAH187_A4285  amino acid ABC transporter, amino acid-binding protein  22.75 
 
 
259 aa  42.4  0.009  Bacillus cereus AH187  Bacteria  unclonable  0.00000000352358  n/a   
 
 
-
 
NC_009616  Tmel_0499  extracellular solute-binding protein  22.79 
 
 
457 aa  42.4  0.009  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
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