Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1454 |
Symbol | |
ID | 4437958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1361760 |
End bp | 1362557 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639677060 |
Product | amino acid ABC transporter periplasmic protein |
Protein accession | YP_820811 |
Protein GI | 116628192 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00353635 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAT TTTGGTTTAT GCTTACAGCC CTAGTTGCCA CGTGTTTTCT TGTTGCATGT AGGGGGAGTC AAGGAGTGAG CACAAAAACG ATTAAGGAAA ATAAGAAAAT TGTCGTAGCG ACAGAGTCTG AATTTGCACC ATTTGAATTC AAATCGTTGG TCAATGGCAA GGATACCTTA GTTGGAGCAG ACATCGAGTT GGCTAAAGCT ATCGGGAAAA AACTTGGTGT GAAAGTTGAA TTTTCTGTTA TGTCTTTTGA CAATGTCCTT GCTAGTGTGC AAAGTGGTAA AGCAGACATT GCCATTGCAG GGATCTCGGT AACAGACGAG CGTAAAAAAG TCTATGATTT TTCTGATAGC TACTATACCT CTGAAAATGT AGTGATTGTC AAAAAAGACA AGGTAAATGA TTTTACAAGT GCTGATAGTC TCGCTAAACA AACTGTCGGT ACGCAAAAAG GGTCTGTTCA AGAAACAATT GCTAAGAAAC AATTCTCTAA GGCAAGTGTG GTTTCACTCG CTTCAAATGG CGAGATGATT AACGAACTCA AGTCAGGACA GATTCAAGCG GTTGTCCTTG AAAAAGCTAT TGCAGAAGGT TATATCGCAC AAAATGATGA TTTAACCCTT GCCAGCTTTA ACCTTAAGTC AGATAGTTCA GATGCTTATG CAGTCGCGAT ACGTAAGGGT TCGGACGATT TACTTAAAGA AATCAATGCT GTCATCAAAG AGACCAAGGA GTCTGGAAAA TTTGACCAAT GGTTAAAAGA AGCATCAAGT TACAAACAAA GTAAGTAA
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Protein sequence | MKKFWFMLTA LVATCFLVAC RGSQGVSTKT IKENKKIVVA TESEFAPFEF KSLVNGKDTL VGADIELAKA IGKKLGVKVE FSVMSFDNVL ASVQSGKADI AIAGISVTDE RKKVYDFSDS YYTSENVVIV KKDKVNDFTS ADSLAKQTVG TQKGSVQETI AKKQFSKASV VSLASNGEMI NELKSGQIQA VVLEKAIAEG YIAQNDDLTL ASFNLKSDSS DAYAVAIRKG SDDLLKEINA VIKETKESGK FDQWLKEASS YKQSK
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