| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_03950 |
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| Symbol | |
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| ID | 8394287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 469543 |
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| End bp | 470637 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644985159 |
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| Product | periplasmic component of amino acid ABC-type transporter/signal transduction system |
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| Protein accession | YP_003142805 |
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| Protein GI | 257063133 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.72321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.568441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGTGCG GACGTCCCTA CGACGGCGCA ACCGCAGCTC CAGCGGGAAA GGCGAATCCC
GAAACCACCG CCCCATCAGG CGCTCAGCCG ACGCAATTCA AACGCGGCAT CGCCATAGCA
ATCGCCGCGG CGGCCGTGGT TCTGGTTGCT GCAGTCGTTG CGTTGGCCCT GTTCGTCCTG
GGTTCGGGCG ACGAGGCGTC CGAGGTCGAC GACGCCGGCA AGACCAAAAC CGAGTCCGTC
GAAACGAAAG ATGAGGCGAA AACTGAATCC GACACCGGAG ATGCAGAAGG CACGGTGGGC
GGTTTCGGAA TGGGCAGTTC GAGCGCCGCG CCGAGCGCTT CGGATGAGAA CGCCTTCATC
GTCGGCTTCG ACGGCGATTA CCCGCCCTTC GGATACCAGG CCGACCCCGG CGAAGACGGG
TACCTGGCCG ACAACGGACA GACGTACACC GGTTTCGACC TGGACCTGGC CGCCGAGGTC
TGCAACCGCA ACGGCTGGAC GCTGAAGGTT CAACCCATCG ACTGGGACTC CAAGGACGCC
ATGCTTGAAT CCGGCGAAAT CACGTGCGTG TGGAACGGCT TCACCTACGA TAACTACCAG
ACCCAGTACG CGTGGTCCGA CCCGTATATG TACAACCTTC AGGTGGTTGT CGTGAGGGCA
GATTCCGGCA TCTACTCGCT GAGCGACCTG GCCGGCAAGA ACGTCGTCAC CCAGGATTAC
TCTTTCGCAT TCGACTTGCT CGAGTACGAC GACTCCTACA CCGCCATTGC AGCCACCTTC
AATGGCGGCG GTATCGGCAC GGTAGGCTCG TACACCGAGG CGTTCGACCA GCTCGAGCAA
GGCGCTGTCG ATGCGGTCGT TTGCGACAGC GGCACTGCCC TGCAGGCGAT GGCCGACCAT
CCGGATGCAT TCATGCAGCA GGACGAGACG CTGTACGTCG AGCACTATGC CATTGCTTTC
GCCCCAGGTC AGGAGGGTAT GGCGCAAACC GTTTCCGACA CGCTGAGGGA AATGGACGCA
GACGGATTCG TCGAGGAGCT GTGCGCCAAA TACGAAGGCG ACGTCGCCTA CTCCGATTGG
TGCCTCCGCA ACTAA
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| Protein sequence | MQCGRPYDGA TAAPAGKANP ETTAPSGAQP TQFKRGIAIA IAAAAVVLVA AVVALALFVL
GSGDEASEVD DAGKTKTESV ETKDEAKTES DTGDAEGTVG GFGMGSSSAA PSASDENAFI
VGFDGDYPPF GYQADPGEDG YLADNGQTYT GFDLDLAAEV CNRNGWTLKV QPIDWDSKDA
MLESGEITCV WNGFTYDNYQ TQYAWSDPYM YNLQVVVVRA DSGIYSLSDL AGKNVVTQDY
SFAFDLLEYD DSYTAIAATF NGGGIGTVGS YTEAFDQLEQ GAVDAVVCDS GTALQAMADH
PDAFMQQDET LYVEHYAIAF APGQEGMAQT VSDTLREMDA DGFVEELCAK YEGDVAYSDW
CLRN
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