Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2725 |
Symbol | |
ID | 4014607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2872111 |
End bp | 2872878 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637942389 |
Product | extracellular solute-binding protein |
Protein accession | YP_549539 |
Protein GI | 91788587 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.377172 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTCT TGCAAAAAAT AGCGGCTACG GCCGGACTGT TCACACTCGC GCTGGGCGGC GTCCATGCCC AGAACACCGA GCTGGTGGTC GGCTCCAGCG CCACCTACCG GCCGTTTGCC TATGAAAGCC CGAGCAAGGA CATCGTCGGC TACGACGTGG ACATGATCAA GGCCATCGCC CAGAAGGCTG GCCTGAAGAT CAAGATCGTC AACACGCCCT GGACCGGCAT CTTCGCCGCC CTCAACAACG GCGACCTGGA CCTGGTGATC TCCGGCGTGA CCATCAACGA CAAGCGCAAG CAGTCCTACG ACTTCAGCAC CCCCTACTTC GAGGCGCGCC AGCTGCTCGC CGTGCACAGC AACAGCACCG CCAAAGGCCT GAAGGACCTG GCCGGCAAAA AGATCGGTGT GGTCACCGGC AGCACTGGCG ACGACATGGC CTCGCGCGAG TTCGGCAAGA CCAACCCCGA CATCCGCCGC TTCGAGAGCA CGCCCGTGGT GATCTCCGAG CTGGCCAACA ACGGCCTGGA TGCGGCCATC GGCGACAACG GCGTCATTGC CTTCCGCGCC CAGGAGCACA AGCAGCTCAA GACCGTCAGC GACCCGGCCT TTCCCAAGGA GTACTTCGGC ATCGTCGTCA AGCAGGGCAA CAAGGCCTTG CTGGACAAGC TCAACGCCGG CCTGGCCGCG GTGAAAGCCG ACGGAAGCTA CGCGCAGATC TACAAGAAGT GGTTCCAGGC TGAAGCCCCC GTGCTACCGG CCCAATAA
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Protein sequence | MNLLQKIAAT AGLFTLALGG VHAQNTELVV GSSATYRPFA YESPSKDIVG YDVDMIKAIA QKAGLKIKIV NTPWTGIFAA LNNGDLDLVI SGVTINDKRK QSYDFSTPYF EARQLLAVHS NSTAKGLKDL AGKKIGVVTG STGDDMASRE FGKTNPDIRR FESTPVVISE LANNGLDAAI GDNGVIAFRA QEHKQLKTVS DPAFPKEYFG IVVKQGNKAL LDKLNAGLAA VKADGSYAQI YKKWFQAEAP VLPAQ
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