Gene Daro_3976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3976 
Symbol 
ID3567475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4273850 
End bp4274632 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content56% 
IMG OID637682449 
Producthypothetical protein 
Protein accessionYP_287173 
Protein GI71909586 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value0.834147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATTC GCTGTGTCTT GGCGTTGTGG ATCGTCTTCG GCAGTCTCGG CATCGCCAGC 
GCGAGCGGAC CGGACTGCTC GCGTCCATAT ACCCTCGCAC TGCATGATCA TGGCCTCCTG
TATTCTGCCG CCACCGACAC CGGTATCGAC AAGGATGTGG CTGACGAATT GATTCGCCGC
TCAGGATGCA AGGTGACCGT CAGCCTGATG GCCAGGGCGC GCATCTGGCA GTTGATCGAA
TCCGGGGCGC TCGATTTCAG CTTGTCTGGC ATTAACAATG CAGAACGCGA CAAGTTCGCT
GCTTTTGCCT GGTATTTCAG CAATAAATAC TATTTGTTGG TGCGCAAGGA TTCCGGCGTG
TCGAATCGGG CGGATTTCGA GCGGAACGAA AAATTGCAGC TCGGTGTTAT TCGTGGCTTC
CGGTACAGCG AAACGGCCAA TCGTCTGGTC GATCGGCTGC AGGCGACGAA CCGTCTTAGT
CAGGCCGGTG GCCTGGCGCC GTTGTACCAG ACGCTGATCC TGAATCACAT TCAGGGGATG
ATCATCGAGC CTTTTGATTA TCCGTCACTG GAAGAAAAGC AGATTCGCGA CCTGAGCACG
ATCATCGAGT TCAACGACCC GGCGGTTCCG CACGGCCTGA TCATGTCGAA AAAGGCGCTG
CCGACCGCGG AGCAGGAAAA GTGGCGTTCG CTGGTGACTG AAATGCGTCG TGACGGCACC
ATGCGGCGAA TTTTCGAGAA ATACTTCAGG CCAGACCTGG CTGCCGCCAT GGTTGATTTT
TAG
 
Protein sequence
MLIRCVLALW IVFGSLGIAS ASGPDCSRPY TLALHDHGLL YSAATDTGID KDVADELIRR 
SGCKVTVSLM ARARIWQLIE SGALDFSLSG INNAERDKFA AFAWYFSNKY YLLVRKDSGV
SNRADFERNE KLQLGVIRGF RYSETANRLV DRLQATNRLS QAGGLAPLYQ TLILNHIQGM
IIEPFDYPSL EEKQIRDLST IIEFNDPAVP HGLIMSKKAL PTAEQEKWRS LVTEMRRDGT
MRRIFEKYFR PDLAAAMVDF