Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3976 |
Symbol | |
ID | 3567475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 4273850 |
End bp | 4274632 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637682449 |
Product | hypothetical protein |
Protein accession | YP_287173 |
Protein GI | 71909586 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 0.834147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTATTC GCTGTGTCTT GGCGTTGTGG ATCGTCTTCG GCAGTCTCGG CATCGCCAGC GCGAGCGGAC CGGACTGCTC GCGTCCATAT ACCCTCGCAC TGCATGATCA TGGCCTCCTG TATTCTGCCG CCACCGACAC CGGTATCGAC AAGGATGTGG CTGACGAATT GATTCGCCGC TCAGGATGCA AGGTGACCGT CAGCCTGATG GCCAGGGCGC GCATCTGGCA GTTGATCGAA TCCGGGGCGC TCGATTTCAG CTTGTCTGGC ATTAACAATG CAGAACGCGA CAAGTTCGCT GCTTTTGCCT GGTATTTCAG CAATAAATAC TATTTGTTGG TGCGCAAGGA TTCCGGCGTG TCGAATCGGG CGGATTTCGA GCGGAACGAA AAATTGCAGC TCGGTGTTAT TCGTGGCTTC CGGTACAGCG AAACGGCCAA TCGTCTGGTC GATCGGCTGC AGGCGACGAA CCGTCTTAGT CAGGCCGGTG GCCTGGCGCC GTTGTACCAG ACGCTGATCC TGAATCACAT TCAGGGGATG ATCATCGAGC CTTTTGATTA TCCGTCACTG GAAGAAAAGC AGATTCGCGA CCTGAGCACG ATCATCGAGT TCAACGACCC GGCGGTTCCG CACGGCCTGA TCATGTCGAA AAAGGCGCTG CCGACCGCGG AGCAGGAAAA GTGGCGTTCG CTGGTGACTG AAATGCGTCG TGACGGCACC ATGCGGCGAA TTTTCGAGAA ATACTTCAGG CCAGACCTGG CTGCCGCCAT GGTTGATTTT TAG
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Protein sequence | MLIRCVLALW IVFGSLGIAS ASGPDCSRPY TLALHDHGLL YSAATDTGID KDVADELIRR SGCKVTVSLM ARARIWQLIE SGALDFSLSG INNAERDKFA AFAWYFSNKY YLLVRKDSGV SNRADFERNE KLQLGVIRGF RYSETANRLV DRLQATNRLS QAGGLAPLYQ TLILNHIQGM IIEPFDYPSL EEKQIRDLST IIEFNDPAVP HGLIMSKKAL PTAEQEKWRS LVTEMRRDGT MRRIFEKYFR PDLAAAMVDF
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