Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0311 |
Symbol | |
ID | 3713202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 357019 |
End bp | 357765 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | extracellular solute-binding protein |
Protein accession | YP_346044 |
Protein GI | 77456539 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00127977 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAACT ACAAAAAGGT CTTCCTGGCC GCCGCCGTCA CCCTCGCGTT CAGCGCCGGT GCCATGGCCG AGACCCTGAA GATGGGCATC GAAGCGGCTT ACCCGCCGTT CAACAATAAA GACGCCAGCG GCAACGTCGT CGGCTTCGAC AAAGACATCG GCGACGCCCT GTGCGCCAAG ATGAAAGTTG AATGCTCCGT GGTCACCTCC GACTGGGACG GCATCATCCC GGCCCTGAAC GCCAAGAAGT TCGACTTTCT GATCTCCTCG ATGTCGATCA CCGACGAGCG CAAGGGCGCG GTGGACTTCA CCGACCCGTA CTACTCCAAC AAACTGCAAT TCATCGCGCC GAAGGATAAA GAGTTCAAGA CCGACAAGGA CTCCCTCAAA GGCAAAGTGA TCGGCGCCCA GCGCGCGACC CTCGCCGGTA CCTTCATGGA AGACAACATG CCGGGCGTCG AAGTAAAACT CTACGACACC CAGGAAAACG CCTACCTCGA CCTGATCTCC GGTCGCCTGG ACGGCATCCT CGCCGACAAA TACGTCAACT ACGAGTGGCT GAAAAGCGAC GCCGGCAAAG CCTATGAATT CAAGGGCGAT CCGGTGGAAG AAAGCGACAA GATCGGTATC GCTGTACGCA AAGGCGACCC GATCCGCGAG AAGCTGAATG CTGCGCTGAA GGAAATCGTT GCCGACGGCA CCTACAAGAA GATCAACGAC AAGTACTTCC CGTTCAGCAT CTACTGA
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Protein sequence | MQNYKKVFLA AAVTLAFSAG AMAETLKMGI EAAYPPFNNK DASGNVVGFD KDIGDALCAK MKVECSVVTS DWDGIIPALN AKKFDFLISS MSITDERKGA VDFTDPYYSN KLQFIAPKDK EFKTDKDSLK GKVIGAQRAT LAGTFMEDNM PGVEVKLYDT QENAYLDLIS GRLDGILADK YVNYEWLKSD AGKAYEFKGD PVEESDKIGI AVRKGDPIRE KLNAALKEIV ADGTYKKIND KYFPFSIY
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