| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0567 |
|---|
| Symbol | |
|---|
| ID | 4204358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 676152 |
|---|
| End bp | 676988 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642565127 |
|---|
| Product | amino acid ABC transporter |
|---|
| Protein accession | YP_697894 |
|---|
| Protein GI | 110801606 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA ATATATTTAA GAAGATGTTA TCAGTGGCTA TGATTGGAGG ATTGACTTTA
AGTTTAGCAG GATGTGGGGC AAAAACTGCT AAAGAAAATG GATCTAATGA TAAGGTAGCT
AAGATAAAAG AAAGTGGAAA ATTAGTAGTT GGTCTTAGTG CTGATTATGC ACCTTATGAA
TTCCATATAA TGAAAGATGG AAAAGACCAA ATTGTTGGTT TAGATATAGA CATTGCAAAA
GAGGTTGCTA AAAATCTTGG GGTTGATTTA GAAATTAAAG AGATGGAATT TGGGGCTATA
ATTCAATCTG TTAAAAATGG AATGATTGAT ATGGGGATTT CAGGAATAAC TCCTGATGAG
AAAAGAAAAG AAGCAGTAGA TTTTTCAGAT ATTTATTATG AAGCAGAGCA AGGAATATTA
ATAAATAAAG ATAATAAAGA ATCTATAAAA GGAATTGGGG ATTTAAAAGG AAAAAAAGTT
GGGGCTCAAA TGGGGTCTAT TCAAGCAGAG ATAGCTAAAG GAATAGAAGG AGCCGATGTT
AAGCTTTTAG ATAATGTAAA TACTTTAATT TTAGAATTAA AAACTGGTAA GTTAGATGCT
GTAATTACTG AACTTCCTGT TGCTAAAATA GCTTCAGAGG TTAATTCTGA GTTAGCTGTT
GCAGATGAGG TAATTAAAAA CTCAGAGGGG GGTTCAGCCA TAGCAATACA AAAAGGAAAT
AAGGACTTAG TTGATGAAGT CAATTCTACA ATTAAAGAGT TAAAAGAAAA TGGAAAGATA
GATCAATTTA CAAATGATGC TATTGAATTA GTTCCATATC AAAAGAAAGA AGAATAA
|
|---|
| Protein sequence | MKKNIFKKML SVAMIGGLTL SLAGCGAKTA KENGSNDKVA KIKESGKLVV GLSADYAPYE
FHIMKDGKDQ IVGLDIDIAK EVAKNLGVDL EIKEMEFGAI IQSVKNGMID MGISGITPDE
KRKEAVDFSD IYYEAEQGIL INKDNKESIK GIGDLKGKKV GAQMGSIQAE IAKGIEGADV
KLLDNVNTLI LELKTGKLDA VITELPVAKI ASEVNSELAV ADEVIKNSEG GSAIAIQKGN
KDLVDEVNST IKELKENGKI DQFTNDAIEL VPYQKKEE
|
|---|
| |