Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3251 |
Symbol | |
ID | 3960599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3604874 |
End bp | 3605668 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637918071 |
Product | hypothetical protein |
Protein accession | YP_524491 |
Protein GI | 89902020 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTAC GCTATATGGG CAGCTTGATG CTCGCGCTGT GCGCCATTGC CACCTCAGTG GCGGCCGGGC CTGACTGCTC GCGTCCTCTC ACGCTTGCCT TGCATGACCA CGGTCTGCTC TACTCGGCCG ATACCGACGC AGGCATCGAC AAGGATTTTG CCGATGAACT GATCCGCCGC AGCGGCTGCA AAATTGCCGT CAGCCTCATG TCGCGCGCGC GCATCTGGCA GCTGATCGAG TCCGGCGCGC TCGATTTCAG CCTGTCTGGT ATCACCAACG CCGAGCGCAA CCGGTTTGCC GGCTTTGCCT GGTATTTCAG CAACAAATAC TATTTGCTGG TGCGCCGGGA CTCCGGTGTG CGCCAGTTGG CCGACTTCGA GCGCAGTGAC CCGTTTCGGC TCGGGGTCAT CCGCAGCTTT CGCTACAGCG AGTCCGCCAA CCGACTGGTC GACAAACTCA CGCTCGCCAA CCGCGTCAGC CAGGCCAATG GCCTGGCGCC GCTGTATGAG ACGCTGTTGC TCAACCGCAT TCAGGGCATG ATCATTGAGC CCTTCGACTA CCCGGCGCTG GACCAGAAGA AGATTCGCGA CATCACTTCC GTTATTGAGT TTGACGACCC GGCGGTGCCC CACGGCCTCA TCATGTCAAA GAAGGCCTTG AGTCCGGCCG AGCAGGACAA GTGGCGCGCG TTGGTCAACG ACATGCGCGC CGATGGCACC GTGCGGCGCA TCTTCGAGAA ATACTTTGAT CCCGGACTCG CCGCCGCCCT CGTTGCTTTC CAGCCCCCGC CATGA
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Protein sequence | MKLRYMGSLM LALCAIATSV AAGPDCSRPL TLALHDHGLL YSADTDAGID KDFADELIRR SGCKIAVSLM SRARIWQLIE SGALDFSLSG ITNAERNRFA GFAWYFSNKY YLLVRRDSGV RQLADFERSD PFRLGVIRSF RYSESANRLV DKLTLANRVS QANGLAPLYE TLLLNRIQGM IIEPFDYPAL DQKKIRDITS VIEFDDPAVP HGLIMSKKAL SPAEQDKWRA LVNDMRADGT VRRIFEKYFD PGLAAALVAF QPPP
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