| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2291 |
|---|
| Symbol | |
|---|
| ID | 7977788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 2336293 |
|---|
| End bp | 2337075 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644799105 |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_002950265 |
|---|
| Protein GI | 239827641 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000000299609 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT CATTGTTGTT TTTTATTGCT AGCATTTTAT TAATTGGTTT GCTCTCGGCA
TGCGGCACAG GCGGAGAACA GAAAAACGGA AGCGGAGAAC AAAAGAAAGT GTTAAGAATG
GGTACTTCCG CCGACTATGC GCCATTTGAA TATATCGATA CCACAAAAGG CAATGAAATT
ATAGGGTTTG ATGTCGATTT AGCAAAGATG ATTACGAAAG AATTAGGATA TGAATTTGAA
ATTGTCGATA TGGACTTTAC CGGGTTGATT CCGGCATTGC AGTCAGGAAA AGTAGATTTT
GTATTAGCGG GGATGACTCC AACGAAAGAA CGCAAGAAAA ACGTTGATTT CTCGGATGTG
TATTATGTAG CGCGAAACAT GATCGTTTCC AAGAAAGGAA GCGGCATTAA AACAGTTGAG
GATTTAAAAG GAAAAACGGT TGGTGTTCAA ACCGGCTCGA TTCAAGAAGG AGAAGCAAAT
AAAATTGCAA AAAAAGTTGA CATGAAAATT GAAAGCCGCA ACCGCATTCC GGAGTTAATT
CAAGAGATTC AAGCAGGGCG CTTTGATGCA GCAATTATCG AAGATACAGT TGCAAAAGGA
TATCTAGATA GCAGCAATGG CAAACTAGAA GGTCATACAA TCCCGACAGA CAAAGAAAAA
TCAGGATATG CGATTGCTTT CCCAAAAGGA AGCAAGCTTC GCGATGAATT TAACAAAGTA
TTGCAAGAAA AAATGAAAAA CGGCGAAGTG GACAAGTTGA TTAAAAAATG GTTTGACCAA
TAA
|
|---|
| Protein sequence | MKKSLLFFIA SILLIGLLSA CGTGGEQKNG SGEQKKVLRM GTSADYAPFE YIDTTKGNEI
IGFDVDLAKM ITKELGYEFE IVDMDFTGLI PALQSGKVDF VLAGMTPTKE RKKNVDFSDV
YYVARNMIVS KKGSGIKTVE DLKGKTVGVQ TGSIQEGEAN KIAKKVDMKI ESRNRIPELI
QEIQAGRFDA AIIEDTVAKG YLDSSNGKLE GHTIPTDKEK SGYAIAFPKG SKLRDEFNKV
LQEKMKNGEV DKLIKKWFDQ
|
|---|
| |