Gene Bphyt_6720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6720 
Symbol 
ID6277867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3044013 
End bp3044807 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content59% 
IMG OID642617749 
Producthypothetical protein 
Protein accessionYP_001890386 
Protein GI187921354 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCGAC AATGCCTCGG GGGTTTGTTG CTGGCGCTCA GTTGCGTGGG CAACGCCATG 
GCTGCGGGCC CCGACTGTTC GCGTTCGTTC ACGCTCGCTT TACACGATCA CGGTCTGCTC
TATTCCGTCG ACACGGATAC CGGGATCGAC AAGGACTTCG CTGACGAACT GATTCGCCGC
AGCGGTTGCC AGATCAGAGT CAGCCTGATG TCGCGAGCCC GGATCTGGAA GCTGATTGAA
TCCGGCGGAC TGGATTTCAG CCTGTCGGGC ATTACCAACG ACGAGCGTAA TGAGTACGCG
GACTTCGCCT GGTATTTCAG CAACAAGTAC TATCTGTTGG TGCGCAAGGA CGCTGGAATT
CATCGGCTTG CCGACTTCGA GCACAACGAC CGGTTTCAAC TCGGCGTGAT CCGCAGCTTC
CGCTATAGCG ACTCGGCCAA CCGGCTGGTC GACAAGCTGT CGGCCGAAAA TCGCGTCAGC
CAGGCGGGCG GTCTGGAGCC GCTGTATCAG GCGCTGATTC TCCGGCGCAT TCAAGGCATG
ATCATCGAGC CTTTCGATTA CCCTGCAATC GATGAAAAGA AAATCCGCGA CGTAACCACC
ATCGTGGAAT TCGACGACCC CGCCGTGCGC CATGGCCTGA TCATGTCGAA GAAGGCACTG
TCGCCCGCCG AGCGCGAGAA GTGGCGCGCG CTGGTGAATG AGATGCGCGC GGACGGCACC
GTGCGGCGCA TCTTCGAAAA GTACTTCAAA CCTGACCTCG CCGATTCGAT GGTCGATTTC
AAGACGCAGC CGTGA
 
Protein sequence
MIRQCLGGLL LALSCVGNAM AAGPDCSRSF TLALHDHGLL YSVDTDTGID KDFADELIRR 
SGCQIRVSLM SRARIWKLIE SGGLDFSLSG ITNDERNEYA DFAWYFSNKY YLLVRKDAGI
HRLADFEHND RFQLGVIRSF RYSDSANRLV DKLSAENRVS QAGGLEPLYQ ALILRRIQGM
IIEPFDYPAI DEKKIRDVTT IVEFDDPAVR HGLIMSKKAL SPAEREKWRA LVNEMRADGT
VRRIFEKYFK PDLADSMVDF KTQP