| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1275 |
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| Symbol | |
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| ID | 5371856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1518247 |
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| End bp | 1519104 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640829474 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001365489 |
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| Protein GI | 152999808 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000731969 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTGT TTAAATACGT TCCTGTCTTA TTGCTGCTTT TTTTAGCCTT GCCCGCCAAA
AGTGCGTTGC AGGTTAATAG TCCTTTACCC TGTCATAAAA CCATTAAAGT CGGTTATAAC
GACTGGCCTC CCTATGCTTG GCAAGATCCC CAAGGAGAAG CCCAAGGTTT AGATGTGGAT
CTGATGCGGG CATTTGCCGT GTATCTCGGC TGCGAAATCA ATTTTATCAA TGTGCCCGCG
AAGCGATCGC ATCAGATGCT GAAAGCTGGA CAGTTAGATG TGTTGATGGG AGCGACAATG
ACGGATGAAC GTCAGGCTTA TGCGCATTTT TCCAGTTATT ATCGAGACGA AGAGCTGCGC
TTATTCGTGC TCGATGAGCA AAAAGATCAG ATCAATATCG ATAAGTGGGA GGACATTTTT
ACCAAAAAGT TACGCCTGCT TGTGCCTTCA AGCGGTTGGT ATGGCGCCGA TTATCAAGAG
TCTCAATATC GATTAGAGCA GGAGCATTTA TTGGTATTGA GCCCTGACTC AGATAAGTCG
GTACAAATGC TCACCTATGG TCGCGGGGAT ATGATCGTCG GCGATACTAT GGCCATGCCC
TATATTGCCA GCCAGCATCA ACACATCAAG CTAGTGCCGC TCAAGTTAGT GTTAGATCAA
AACCATATCC ATTTAATGCT AAGCAAAGCG AGTATGACGC CAAGCCAGTT AGAGCAGTTT
AATCAGGCGA TTAAGGCCTT GATGGATAAC GGTGAAATTG CACGCGTGAT CAATAAATGG
CAACAAATGT CACTGGCGAA ACAATCCAAT ATGAGCCGCC TAAACAGTCC ACTAAAGACG
CTGTACGTCA GCCCGTAA
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| Protein sequence | MSLFKYVPVL LLLFLALPAK SALQVNSPLP CHKTIKVGYN DWPPYAWQDP QGEAQGLDVD
LMRAFAVYLG CEINFINVPA KRSHQMLKAG QLDVLMGATM TDERQAYAHF SSYYRDEELR
LFVLDEQKDQ INIDKWEDIF TKKLRLLVPS SGWYGADYQE SQYRLEQEHL LVLSPDSDKS
VQMLTYGRGD MIVGDTMAMP YIASQHQHIK LVPLKLVLDQ NHIHLMLSKA SMTPSQLEQF
NQAIKALMDN GEIARVINKW QQMSLAKQSN MSRLNSPLKT LYVSP
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