22 homologs were found in PanDaTox collection
for query gene Svir_13870 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013159  Svir_13870  CRISPR-associated protein, Cse1 family  100 
 
 		 484 aa  982    Saccharomonospora viridis DSM 43017  Bacteria  normal  0.578004  normal  0.601258 
 
 
-
 
NC_009953  Sare_1972  CRISPR-associated Cse1 family protein  36.84 
 
 		 495 aa  265  1e-69  Salinispora arenicola CNS-205  Bacteria  normal  0.355127  normal  1 
 
 
-
 
NC_007333  Tfu_1592  CRISPR-associated Cse1 family protein  36.29 
 
 		 549 aa  257  4e-67  Thermobifida fusca YX  Bacteria  normal  0.440854  n/a   
 
 
-
 
NC_013510  Tcur_0942  CRISPR-associated protein, Cse1 family  38.89 
 
 		 722 aa  249  8e-65  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
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NC_013159  Svir_17140  CRISPR-associated protein, Cse1 family  36.13 
 
 		 525 aa  246  6.999999999999999e-64  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013526  Tter_1896  CRISPR-associated protein, Cse1 family  28.45 
 
 		 533 aa  78.2  0.0000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.189081  n/a   
 
 
-
 
NC_008609  Ppro_2342  CRISPR-associated Cse1 family protein  24.22 
 
 		 506 aa  77.4  0.0000000000005  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_2825  CRISPR-associated Cse1 family protein  25.85 
 
 		 517 aa  73.6  0.000000000008  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013124  Afer_0988  CRISPR-associated protein, Cse1 family  25.97 
 
 		 540 aa  71.6  0.00000000003  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_17350  CRISPR-associated protein, Cse1 family  25.81 
 
 		 567 aa  65.1  0.000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_1230  CRISPR-associated protein, Cse1 family  26.29 
 
 		 561 aa  62.4  0.00000002  Meiothermus silvanus DSM 9946  Bacteria  unclonable  0.00000214368  normal  0.502097 
 
 
-
 
NC_013946  Mrub_3019  Cse1 family CRISPR-associated protein  25.6 
 
 		 516 aa  61.2  0.00000004  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.00000306277  normal  0.0835975 
 
 
-
 
NC_009523  RoseRS_0650  CRISPR-associated Cse1 family protein  23.01 
 
 		 525 aa  58.2  0.0000003  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_3760  CRISPR-associated Cse1 family protein  26.22 
 
 		 525 aa  57.8  0.0000005  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.33895 
 
 
-
 
NC_013235  Namu_3054  CRISPR-associated protein, Cse1 family  26.1 
 
 		 555 aa  55.8  0.000002  Nakamurella multipartita DSM 44233  Bacteria  normal  0.044999  decreased coverage  0.000092711 
 
 
-
 
NC_012560  Avin_17180  hypothetical protein  26.57 
 
 		 516 aa  52  0.00003  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_4093  CRISPR-associated protein, Cse1 family  21.34 
 
 		 518 aa  50.4  0.00007  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_0018  hypothetical protein  25.4 
 
 		 550 aa  49.3  0.0001  Frankia sp. CcI3  Bacteria  normal  0.830051  normal  1 
 
 
-
 
NC_014210  Ndas_1281  CRISPR-associated protein, Cse1 family  25.76 
 
 		 573 aa  46.6  0.001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_3909  CRISPR-associated protein, Cse1 family  24.38 
 
 		 1540 aa  45.1  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0587749  normal  0.0865606 
 
 
-
 
NC_008010  Dgeo_2630  CRISPR-associated Cse1 family protein  24.21 
 
 		 573 aa  43.9  0.006  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
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NC_007333  Tfu_1600  CRISPR-associated Cse1 family protein  27.22 
 
 		 555 aa  43.5  0.008  Thermobifida fusca YX  Bacteria  normal  0.214237  n/a   
 
 
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