More than 300 homologs were found in PanDaTox collection
for query gene Pfl01_4930 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007492  Pfl01_4930  binding-protein dependent transport system inner membrane protein  100 
 
 
267 aa  520  1e-146  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2559  binding-protein-dependent transport systems inner membrane component  43.51 
 
 
283 aa  206  2e-52  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_0040  binding-protein-dependent transport systems inner membrane component  48.03 
 
 
259 aa  204  1e-51  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.832577  normal  0.34867 
 
 
-
 
NC_008786  Veis_3788  binding-protein-dependent transport systems inner membrane component  45.6 
 
 
276 aa  195  6e-49  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.374556  normal 
 
 
-
 
NC_007644  Moth_0466  binding-protein dependent transport system inner membrane protein  43.08 
 
 
262 aa  193  2e-48  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_1646  binding-protein-dependent transport systems inner membrane component  48 
 
 
259 aa  190  2e-47  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2644  binding-protein-dependent transport systems inner membrane component  43.64 
 
 
282 aa  189  4e-47  Dickeya dadantii Ech703  Bacteria  normal  0.285231  n/a   
 
 
-
 
NC_010002  Daci_0146  binding-protein-dependent transport systems inner membrane component  41.53 
 
 
296 aa  186  3e-46  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.159688 
 
 
-
 
NC_007347  Reut_A2719  binding-protein dependent transport system inner membrane protein  38.83 
 
 
284 aa  185  6e-46  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2276  binding-protein-dependent transport systems inner membrane component  42.8 
 
 
257 aa  185  8e-46  Methylobacterium sp. 4-46  Bacteria  normal  0.722283  normal  0.0991744 
 
 
-
 
NC_011884  Cyan7425_3255  binding-protein-dependent transport systems inner membrane component  43.04 
 
 
294 aa  183  2.0000000000000003e-45  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.106321 
 
 
-
 
NC_008786  Veis_3642  binding-protein-dependent transport systems inner membrane component  37.84 
 
 
275 aa  182  6e-45  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.142025  normal 
 
 
-
 
NC_011368  Rleg2_5005  binding-protein-dependent transport systems inner membrane component  41.43 
 
 
267 aa  180  2e-44  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4887  binding-protein dependent transport system inner membrane protein  45.71 
 
 
296 aa  180  2.9999999999999997e-44  Ralstonia eutropha JMP134  Bacteria  normal  0.0123695  n/a   
 
 
-
 
NC_007973  Rmet_2858  binding-protein-dependent transport systems inner membrane component  39.83 
 
 
291 aa  179  4.999999999999999e-44  Cupriavidus metallidurans CH34  Bacteria  normal  0.582448  normal 
 
 
-
 
NC_008752  Aave_2968  binding-protein-dependent transport systems inner membrane component  41.03 
 
 
289 aa  176  4e-43  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0761961  normal 
 
 
-
 
NC_011894  Mnod_0326  binding-protein-dependent transport systems inner membrane component  40.68 
 
 
257 aa  172  5e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.369486  n/a   
 
 
-
 
NC_011729  PCC7424_0058  binding-protein-dependent transport systems inner membrane component  35.09 
 
 
275 aa  171  1e-41  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007516  Syncc9605_1078  ABC transporter, nitrate-like  38.26 
 
 
275 aa  171  1e-41  Synechococcus sp. CC9605  Bacteria  normal  0.193306  normal 
 
 
-
 
NC_007948  Bpro_1046  binding-protein-dependent transport systems inner membrane component  41.53 
 
 
282 aa  169  3e-41  Polaromonas sp. JS666  Bacteria  normal  0.12004  normal  0.278615 
 
 
-
 
NC_012791  Vapar_0155  binding-protein-dependent transport systems inner membrane component  40.83 
 
 
292 aa  166  4e-40  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
255 aa  164  1.0000000000000001e-39  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_013422  Hneap_0791  binding-protein-dependent transport systems inner membrane component  38.22 
 
 
320 aa  163  2.0000000000000002e-39  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1429  binding-protein-dependent transport systems inner membrane component  39.91 
 
 
257 aa  159  3e-38  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.214609  n/a   
 
 
-
 
NC_009485  BBta_6456  ABC transporter permease  41.46 
 
 
258 aa  159  4e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.405099  normal 
 
 
-
 
NC_007947  Mfla_1858  binding-protein-dependent transport systems inner membrane component  36.44 
 
 
321 aa  154  1e-36  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5226  binding-protein-dependent transport systems inner membrane component  34.75 
 
 
323 aa  152  5e-36  Burkholderia phytofirmans PsJN  Bacteria  normal  0.226274  normal 
 
 
-
 
NC_011658  BCAH187_A3058  taurine ABC transporter, permease protein  33.77 
 
 
274 aa  149  5e-35  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6428  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
324 aa  147  1.0000000000000001e-34  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1386  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  33.47 
 
 
323 aa  147  1.0000000000000001e-34  Burkholderia xenovorans LB400  Bacteria  normal  0.173943  normal  0.101646 
 
 
-
 
NC_008062  Bcen_5556  binding-protein-dependent transport systems inner membrane component  34.32 
 
 
324 aa  147  1.0000000000000001e-34  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0488095  n/a   
 
 
-
 
NC_008544  Bcen2424_5921  binding-protein-dependent transport systems inner membrane component  34.32 
 
 
324 aa  147  1.0000000000000001e-34  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4024  binding-protein-dependent transport systems inner membrane component  36.44 
 
 
353 aa  146  3e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3729  binding-protein-dependent transport systems inner membrane component  36.44 
 
 
353 aa  145  5e-34  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.19574 
 
 
-
 
NC_010725  Mpop_3907  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
357 aa  145  6e-34  Methylobacterium populi BJ001  Bacteria  normal  0.0334046  normal  0.137928 
 
 
-
 
NC_006274  BCZK2748  sulfonate/taurine ABC transporter permease  34.95 
 
 
274 aa  142  6e-33  Bacillus cereus E33L  Bacteria  normal  0.947189  n/a   
 
 
-
 
NC_003909  BCE_3060  taurine ABC transporter, permease protein  34.95 
 
 
274 aa  141  9.999999999999999e-33  Bacillus cereus ATCC 10987  Bacteria  normal  0.0244271  n/a   
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
277 aa  139  7e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_009075  BURPS668_A2220  taurine ABC transporter, permease protein  34.08 
 
 
283 aa  138  7.999999999999999e-32  Burkholderia pseudomallei 668  Bacteria  normal  0.215273  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2133  taurine ABC transporter, permease protein  34.08 
 
 
283 aa  138  8.999999999999999e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  0.186654  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0620  permease component of taurine ABC transporter  34.08 
 
 
253 aa  138  8.999999999999999e-32  Burkholderia pseudomallei 1710b  Bacteria  decreased coverage  0.00192231  n/a   
 
 
-
 
NC_008835  BMA10229_2019  taurine ABC transporter, permease protein  34.08 
 
 
285 aa  138  8.999999999999999e-32  Burkholderia mallei NCTC 10229  Bacteria  normal  0.484134  n/a   
 
 
-
 
NC_009079  BMA10247_A0697  taurine ABC transporter, permease protein  34.08 
 
 
283 aa  138  1e-31  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA1580  taurine ABC transporter, permease protein  34.08 
 
 
253 aa  138  1e-31  Burkholderia mallei ATCC 23344  Bacteria  normal  0.477521  n/a   
 
 
-
 
NC_007650  BTH_II0802  taurine ABC transporter, permease protein  34.08 
 
 
283 aa  137  1e-31  Burkholderia thailandensis E264  Bacteria  normal  0.207449  n/a   
 
 
-
 
NC_012792  Vapar_5517  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
256 aa  137  1e-31  Variovorax paradoxus S110  Bacteria  normal  0.16627  n/a   
 
 
-
 
NC_012560  Avin_21990  ABC transporter, inner membrane permease component  33.33 
 
 
273 aa  136  4e-31  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1575  binding-protein-dependent transport systems inner membrane component  33.49 
 
 
254 aa  136  4e-31  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0747147  n/a   
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  32.62 
 
 
279 aa  135  5e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
NC_011769  DvMF_0521  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
292 aa  133  1.9999999999999998e-30  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.367955 
 
 
-
 
NC_007778  RPB_4060  binding-protein dependent transport system inner membrane protein  32.49 
 
 
256 aa  133  3e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3643  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
252 aa  132  7.999999999999999e-30  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000799696  n/a   
 
 
-
 
NC_004311  BRA1188  taurine ABC transporter, permease protein  35.15 
 
 
250 aa  131  1.0000000000000001e-29  Brucella suis 1330  Bacteria  normal  0.0612406  n/a   
 
 
-
 
NC_002947  PP_0231  binding-protein-dependent transport systems inner membrane component  30.93 
 
 
279 aa  130  2.0000000000000002e-29  Pseudomonas putida KT2440  Bacteria  normal  0.33405  hitchhiker  0.000710194 
 
 
-
 
NC_012669  Bcav_3438  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
301 aa  130  2.0000000000000002e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008688  Pden_5005  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
289 aa  130  2.0000000000000002e-29  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0246  binding-protein-dependent transport systems inner membrane component  31 
 
 
279 aa  130  2.0000000000000002e-29  Pseudomonas putida F1  Bacteria  normal  0.0570948  normal  0.0921514 
 
 
-
 
NC_009656  PSPA7_1171  taurine ABC transporter permease  35.53 
 
 
272 aa  130  3e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  0.104716  n/a   
 
 
-
 
NC_007298  Daro_0080  binding-protein dependent transport system inner membrane protein  33.62 
 
 
318 aa  130  3e-29  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1488  binding-protein dependent transport system inner membrane protein  31.93 
 
 
280 aa  130  3e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.106569  normal  0.790334 
 
 
-
 
NC_009636  Smed_3151  binding-protein-dependent transport systems inner membrane component  32.54 
 
 
263 aa  129  4.0000000000000003e-29  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_1127  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
267 aa  129  5.0000000000000004e-29  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_0398  binding-protein-dependent transport systems inner membrane component  36.02 
 
 
278 aa  129  7.000000000000001e-29  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5321  taurine ABC transporter, permease protein  30.6 
 
 
285 aa  128  8.000000000000001e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4981  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
279 aa  128  1.0000000000000001e-28  Pseudomonas putida W619  Bacteria  normal  normal  0.588836 
 
 
-
 
NC_009428  Rsph17025_0765  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
265 aa  128  1.0000000000000001e-28  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6082  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
296 aa  127  2.0000000000000002e-28  Burkholderia phymatum STM815  Bacteria  normal  normal  0.201741 
 
 
-
 
NC_009620  Smed_4861  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
275 aa  127  2.0000000000000002e-28  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0877464 
 
 
-
 
NC_008709  Ping_0049  ABC taurine transporter, binding protein inner membrane component  31.8 
 
 
330 aa  127  2.0000000000000002e-28  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0656508 
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  32.49 
 
 
286 aa  126  4.0000000000000003e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  29.17 
 
 
281 aa  125  5e-28  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_009668  Oant_3505  binding-protein-dependent transport systems inner membrane component  32.35 
 
 
275 aa  125  7e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.197989  n/a   
 
 
-
 
NC_013595  Sros_3065  binding-protein-dependent transport systems inner membrane component  33.95 
 
 
280 aa  125  8.000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.228654 
 
 
-
 
NC_010511  M446_5130  binding-protein-dependent transport systems inner membrane component  35.41 
 
 
272 aa  125  9e-28  Methylobacterium sp. 4-46  Bacteria  normal  0.612608  normal  0.0470724 
 
 
-
 
NC_007953  Bxe_C0085  taurine ABC transporter inner membrane protein  36.75 
 
 
283 aa  125  1e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.664827  normal  0.135193 
 
 
-
 
NC_014150  Bmur_0403  binding-protein-dependent transport systems inner membrane component  30.63 
 
 
256 aa  125  1e-27  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0692  ABC taurine transporter, inner membrane subunit  32.2 
 
 
306 aa  124  2e-27  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.00000000618741  normal  0.0440204 
 
 
-
 
NC_014165  Tbis_1380  binding-protein-dependent transporter inner membrane component  32.31 
 
 
277 aa  124  2e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.153307 
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  35.03 
 
 
254 aa  124  2e-27  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_007347  Reut_A1470  binding-protein dependent transport system inner membrane protein  33.59 
 
 
301 aa  123  3e-27  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  31.3 
 
 
283 aa  123  3e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2787  ABC transporter, permease protein  33.94 
 
 
282 aa  123  4e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0328614  n/a   
 
 
-
 
NC_011894  Mnod_5516  binding-protein-dependent transport systems inner membrane component  36.75 
 
 
262 aa  123  4e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0772  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
302 aa  123  4e-27  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0528102 
 
 
-
 
NC_010681  Bphyt_0509  binding-protein-dependent transport systems inner membrane component  35.51 
 
 
289 aa  122  5e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.085274 
 
 
-
 
NC_010084  Bmul_0421  binding-protein-dependent transport systems inner membrane component  36 
 
 
321 aa  122  5e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.905374 
 
 
-
 
NC_008786  Veis_0766  binding-protein-dependent transport systems inner membrane component  33.62 
 
 
260 aa  122  5e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1763  binding-protein-dependent transport systems inner membrane component  36.4 
 
 
282 aa  122  5e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2515  binding-protein dependent transport system inner membrane protein  31.94 
 
 
282 aa  122  6e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.313862  normal 
 
 
-
 
NC_011901  Tgr7_3082  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
319 aa  122  6e-27  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_12960  taurine ABC transporter permease  35.91 
 
 
272 aa  122  6e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.299757  normal  0.321121 
 
 
-
 
NC_010510  Mrad2831_6162  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
262 aa  122  8e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.577279 
 
 
-
 
NC_009485  BBta_2566  ABC transporter, membrane subunit  33.9 
 
 
252 aa  121  9.999999999999999e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.345232 
 
 
-
 
NC_007510  Bcep18194_A6225  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  35.32 
 
 
320 aa  121  9.999999999999999e-27  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0250  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
280 aa  121  9.999999999999999e-27  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0255  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
279 aa  121  9.999999999999999e-27  Pseudomonas putida GB-1  Bacteria  normal  0.796344  normal 
 
 
-
 
NC_008542  Bcen2424_2884  binding-protein-dependent transport systems inner membrane component  36 
 
 
269 aa  121  9.999999999999999e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1787  binding-protein dependent transport system inner membrane protein  32.62 
 
 
326 aa  120  1.9999999999999998e-26  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4371  binding-protein-dependent transport systems inner membrane component  32.73 
 
 
306 aa  120  1.9999999999999998e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  0.17867  normal 
 
 
-
 
NC_009832  Spro_4564  taurine transporter subunit  27.94 
 
 
279 aa  120  1.9999999999999998e-26  Serratia proteamaculans 568  Bacteria  normal  normal  0.746145 
 
 
-
 
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