Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2858 |
Symbol | |
ID | 4039686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3107292 |
End bp | 3108167 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637978258 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_585000 |
Protein GI | 94311790 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.582448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAAG CCTCCACGCC AACCACCGCG GCCGCTGCCC GCGTGCCCGC GCCGATCGAG GCGCAGGGCG CGCCCGCGCG GCGCGCGCGC CATCCGTGGA TGTCGCCGCT GGTGCCGGTA TCGCCCCGCG CGCGCTGGCT GCTTGGCATG TCGTTCTTCG TCGCGTTCTT CGCGGTGTGG GCCGTCGCCA CGCTGGGCGG CTTCGTGTCG CGCACGTTCC TGGCCGATCC GCTGACGATG GCGCATGAAG GCTGGAGGCT CTTCACGCAG TACGGCTTCA TCGGCGATAT CGGCATGACC GTGTGGCGCG TGGTGGGCGG GTTCGTGCTG GCCGCGTTGC TGGCCGTGCC GCTCGGCATC TTCATGGGCG CGTACAAGGC AGCGGAAGCG TTCTTCGAAC CGTTCGTCTC GTTCTGCCGC TACCTGCCGG CGTCGGCGTT TATTCCGCTG CTGATCCTGT GGGCAGGTAT CGGCGAGACG CAGAAGCTGC TGGTGATCTT CATCGGCTCG TTTTTTCAGA TCGTGCTGAT GGTGGCGGTG ACGGTGGGCG GCGCGCGCAA GGATCTGGTG GAAGCGGCCT ACACGCTGGG CGCCACGCCG CGTGGCATCG TGCGGCGCGT GCTGATTCCG GGCGCCGCGC CCGATATCGC CGAGACGCTG CGTCTGGTGC TCGGCTGGGC CTGGACCTAT GTGATCGTGG CTGAGCTGAT CGGCTCGTCG TCAGGCATCG GCCACATGAT CACGGACAGC CAGGCACTGC TGAATACCGG ACAGATCATC TTCGGCATCA TCGTCATCGG CTGCATCGGG CTGGTGTCGG ACCTCGTCTT CAAGCAGGCC AACCAGCGCC TGTTCCCGTG GAGTTCGATC AAATGA
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Protein sequence | MSQASTPTTA AAARVPAPIE AQGAPARRAR HPWMSPLVPV SPRARWLLGM SFFVAFFAVW AVATLGGFVS RTFLADPLTM AHEGWRLFTQ YGFIGDIGMT VWRVVGGFVL AALLAVPLGI FMGAYKAAEA FFEPFVSFCR YLPASAFIPL LILWAGIGET QKLLVIFIGS FFQIVLMVAV TVGGARKDLV EAAYTLGATP RGIVRRVLIP GAAPDIAETL RLVLGWAWTY VIVAELIGSS SGIGHMITDS QALLNTGQII FGIIVIGCIG LVSDLVFKQA NQRLFPWSSI K
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