Gene Rmet_2858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2858 
Symbol 
ID4039686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3107292 
End bp3108167 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content67% 
IMG OID637978258 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_585000 
Protein GI94311790 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.582448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAG CCTCCACGCC AACCACCGCG GCCGCTGCCC GCGTGCCCGC GCCGATCGAG 
GCGCAGGGCG CGCCCGCGCG GCGCGCGCGC CATCCGTGGA TGTCGCCGCT GGTGCCGGTA
TCGCCCCGCG CGCGCTGGCT GCTTGGCATG TCGTTCTTCG TCGCGTTCTT CGCGGTGTGG
GCCGTCGCCA CGCTGGGCGG CTTCGTGTCG CGCACGTTCC TGGCCGATCC GCTGACGATG
GCGCATGAAG GCTGGAGGCT CTTCACGCAG TACGGCTTCA TCGGCGATAT CGGCATGACC
GTGTGGCGCG TGGTGGGCGG GTTCGTGCTG GCCGCGTTGC TGGCCGTGCC GCTCGGCATC
TTCATGGGCG CGTACAAGGC AGCGGAAGCG TTCTTCGAAC CGTTCGTCTC GTTCTGCCGC
TACCTGCCGG CGTCGGCGTT TATTCCGCTG CTGATCCTGT GGGCAGGTAT CGGCGAGACG
CAGAAGCTGC TGGTGATCTT CATCGGCTCG TTTTTTCAGA TCGTGCTGAT GGTGGCGGTG
ACGGTGGGCG GCGCGCGCAA GGATCTGGTG GAAGCGGCCT ACACGCTGGG CGCCACGCCG
CGTGGCATCG TGCGGCGCGT GCTGATTCCG GGCGCCGCGC CCGATATCGC CGAGACGCTG
CGTCTGGTGC TCGGCTGGGC CTGGACCTAT GTGATCGTGG CTGAGCTGAT CGGCTCGTCG
TCAGGCATCG GCCACATGAT CACGGACAGC CAGGCACTGC TGAATACCGG ACAGATCATC
TTCGGCATCA TCGTCATCGG CTGCATCGGG CTGGTGTCGG ACCTCGTCTT CAAGCAGGCC
AACCAGCGCC TGTTCCCGTG GAGTTCGATC AAATGA
 
Protein sequence
MSQASTPTTA AAARVPAPIE AQGAPARRAR HPWMSPLVPV SPRARWLLGM SFFVAFFAVW 
AVATLGGFVS RTFLADPLTM AHEGWRLFTQ YGFIGDIGMT VWRVVGGFVL AALLAVPLGI
FMGAYKAAEA FFEPFVSFCR YLPASAFIPL LILWAGIGET QKLLVIFIGS FFQIVLMVAV
TVGGARKDLV EAAYTLGATP RGIVRRVLIP GAAPDIAETL RLVLGWAWTY VIVAELIGSS
SGIGHMITDS QALLNTGQII FGIIVIGCIG LVSDLVFKQA NQRLFPWSSI K