Gene Daro_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0080 
Symbol 
ID3569719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp97608 
End bp98564 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content63% 
IMG OID637678515 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_283309 
Protein GI71905722 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTC CCACCCTCTG GCTTAATGCT CCACAACGAC GACGGGCGTT GCTGACAGTG 
GGTTCATTCC TGCTGCCGAT CCTGGTCTGG TGCCTGGTCA GCTACCTGCC GTTCGTCTGG
CACCCGCAAG TCCTGATCGA TGAACCCGGC GGCGTCGATT ACTTTCAAAC TGGCATGCGC
GTCGACCGCA GCGACTTTGC CGACCAGCTG GCCGACATGG CACAACAGGG CCTCCCCCTG
CCCAGCGGCT CGCCAGCCAA CCCGATCTAT CTGCCGGCGC CGCATGAAGT GGCCAAGGCC
TTCTACAGCG GCTTCACCTC GCCGCCCGAA CAAAAGAATG CACCCTGGCT GCATGAAAGC
CTGTGGCACA GCATCCAGAT CATTTTCTGG GGCTTCGTCA TCTCGTCGAT CGTCGGCGTA
CCGCTCGGCA TCCTGGCTGG CACCTACGCC AGCCTCGGCC GCCTGAGCGA ACCCTTCATC
GAATTCTTCC GCTATCTGCC CGCCCCGGCC TTCGGCGCGC TGGCTGTCGC CGTACTCGGC
ATCTATGACG GCCCGAAAAT CGCAATCATC GTCATCGGCA CCTTCTTCCA GCAGGTGCTG
ATCATCGCCA ACACCACCCG CAAACTCGAA GCGACGCTGA TCGAAGCTGC CCGCACCCTC
GGGTCGCGTG GCTGGCGCCT GATCGCCCGG GTGGTCGTTC CCGGCATCCT GCCCAACCTC
TACCAGGACC AGCGCATCCT GCTCGGCTGG GCATGGACCT ACCTGATCGT CGCCGAACTG
ATCGGCACCA GCAGCGGCAT CACCTGGTAC ATCACTCAAC AGGCGCGCTA CCAGCATTTC
GACAACGTTT ACGCCGCCAT CATCATCATC GGCATCATCG GCTTCGGCAG CGACCTGCTG
CTCGCTCGCC TGGGCCGCAA GCTTTTCCCC TGGGATAGCG GCCGGGAAAA AGGCTGA
 
Protein sequence
MSAPTLWLNA PQRRRALLTV GSFLLPILVW CLVSYLPFVW HPQVLIDEPG GVDYFQTGMR 
VDRSDFADQL ADMAQQGLPL PSGSPANPIY LPAPHEVAKA FYSGFTSPPE QKNAPWLHES
LWHSIQIIFW GFVISSIVGV PLGILAGTYA SLGRLSEPFI EFFRYLPAPA FGALAVAVLG
IYDGPKIAII VIGTFFQQVL IIANTTRKLE ATLIEAARTL GSRGWRLIAR VVVPGILPNL
YQDQRILLGW AWTYLIVAEL IGTSSGITWY ITQQARYQHF DNVYAAIIII GIIGFGSDLL
LARLGRKLFP WDSGREKG