Gene Pfl01_4930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4930 
Symbol 
ID3714052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5554354 
End bp5555157 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content62% 
IMG OID 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_350658 
Protein GI77461151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGC GCAATTCATG GCTGAGCCGC TGCATCACGC CGAAGACCGG GTTGCCGGTG 
CCGGTGGTGT GGAGCGCCAG CGGGCTGGCC TGGGTGTTGC TGGTCGGCCT GTGGGCCGGG
TTGTCCTACG GCGGCATCGT GCCGGGAATG TTCCTGCCGA CGCCCGGCGC GGTGGTTGAA
GCGGCGGTGC GTCTGAGCCG CGACGGCACT CTTGGCCAGC ATGTCTGGGC CAGTGTCGAA
GTGGTGATGG TCGGTTTCAT CGTGTCGTCG CTGGTGGCGG TGCCGCTGGG TTTGTTGATG
GGCAGTTTTC GCATCGTCCA GGCGTTCCTC GAACCGCTGG TCAATTTCAT CCGCTACCTG
CCGGTGACCT CGTTCGTGCC ACTGTTCATC CTCTGGATTG GTATCGGTCT GGAGCAGCGG
GTGTCGGTGA TCATTTTCGG CGTGTTCTTC CAGCAACTGG TGATGATCGC GGACGTGTCC
AAAGGCATTT CCAAGGACTT GATCAACGCC TCCTACACCC TCGGCTCGAA CCGGCGTGAC
GCGGTGCTGC ATGTGATCGC CCCGGCGTCG TTGCCCGGCG TGCTCGACAC CTTGCGGGTG
ACTATGGGCT GGGCCTGGAC CTATCTGGTG GTCGCCGAAC TGGTCGCCGC GTCCAGTGGC
CTCGGTTACT TGAGCCTCAA GGCCATGCGC GGCTTTCAGG TCGATGTGAT TTTTCTCGCC
ATCGCGATCA TCGGCCTGCT CGGCCTGGTC ACCGATCAAC TGTTCCGCTT CTTGCGTTTG
AGGATTGCCG CATGGGCTCA GTAA
 
Protein sequence
MFKRNSWLSR CITPKTGLPV PVVWSASGLA WVLLVGLWAG LSYGGIVPGM FLPTPGAVVE 
AAVRLSRDGT LGQHVWASVE VVMVGFIVSS LVAVPLGLLM GSFRIVQAFL EPLVNFIRYL
PVTSFVPLFI LWIGIGLEQR VSVIIFGVFF QQLVMIADVS KGISKDLINA SYTLGSNRRD
AVLHVIAPAS LPGVLDTLRV TMGWAWTYLV VAELVAASSG LGYLSLKAMR GFQVDVIFLA
IAIIGLLGLV TDQLFRFLRL RIAAWAQ