Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1646 |
Symbol | |
ID | 8419477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1896390 |
End bp | 1897169 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645038220 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003198508 |
Protein GI | 258405766 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAAA GCCGCCTCTT TGCAAAACAC GGCAAAAGGA CAGGGTTGAT CGCCCTGTCC TTTTTGGTGT TGTTGGCCCT GTGGGCCCTG GCCGCCTATA GCGGCTGGGT CAAGGAATTG TTCCTGCCCC GTCCCGATGC GGTCCTGGGG GCATTTGTGG AGATGCACCG CGAAGGGGTC CTCCTGGCCT ACACCTGGGC CTCGACGTAC CGGGTCATGG TCGGCTGGGC CCTGGCAGTA CTGTTTGGCG TTCCCCTGGG GCTGGCCATC GCCACGTCGA AGCGCACTGC GGCGATCTGC GCACCGCTGA TCGAATTCGC CAGGTATTTG CCGGTGGTGG CTCTGGTCCC TTTGACCCTG CTCTATTTCG GGATCGGTGA CGCCCAGAAA TTTGTGGTCA TTTTTCTGGG GACCTTTTTC CAACTCGTGC TTATGGTCGT CGATTCCGTG GCTGCTGTGC CAGCGGATCT GACCCGAGCG GCGGCCACGC TGGGGGCATC CCGGGCCCAG TCCTATCGTT TGGTGCTCTT TCCCGGCGCG TTGCCTGGTA TTCTGGATAA TCTCCGGATC ACCATCGGCT GGGCCTGGAC CTACCTGGTG GTGGCCGAAC TCGTGGCCGC CAATTCCGGG CTGGGGTATA TGATCCTGCG GGCCCAGCGG TTTCTGGCCA TCGACCGTAT CTTCGCCGGG CTGATCATTA TCGGTCTGCT CGGACTGGCC ACGGACTGTC TGTTCAAACT CCTCACCCGG CTGGTCGTAC CCTGGAGCGA GAAACAGTGA
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Protein sequence | MAQSRLFAKH GKRTGLIALS FLVLLALWAL AAYSGWVKEL FLPRPDAVLG AFVEMHREGV LLAYTWASTY RVMVGWALAV LFGVPLGLAI ATSKRTAAIC APLIEFARYL PVVALVPLTL LYFGIGDAQK FVVIFLGTFF QLVLMVVDSV AAVPADLTRA AATLGASRAQ SYRLVLFPGA LPGILDNLRI TIGWAWTYLV VAELVAANSG LGYMILRAQR FLAIDRIFAG LIIIGLLGLA TDCLFKLLTR LVVPWSEKQ
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