97 homologs were found in PanDaTox collection
for query gene Daci_4409 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_4409  putative anti-sigma regulatory factor, serine/threonine protein kinase  100 
 
 
134 aa  275  2e-73  Delftia acidovorans SPH-1  Bacteria  normal  0.765938  normal 
 
 
-
 
NC_008752  Aave_2972  putative anti-sigma regulatory factor, serine/threonine protein kinase  64.18 
 
 
134 aa  160  5.0000000000000005e-39  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.672639 
 
 
-
 
NC_007348  Reut_B4972  ATP-binding region, ATPase-like  56.59 
 
 
152 aa  154  4e-37  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3742  putative anti-sigma regulatory factor, serine/threonine protein kinase  48.8 
 
 
137 aa  139  9.999999999999999e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  0.943736  n/a   
 
 
-
 
NC_010676  Bphyt_5777  putative anti-sigma regulatory factor, serine/threonine protein kinase  50 
 
 
155 aa  138  3e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2488  putative anti-sigma regulatory factor (Ser/Thr protein kinase)  47.62 
 
 
129 aa  133  9e-31  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2414  putative anti-sigma regulatory factor, serine/threonine protein kinase  56.45 
 
 
134 aa  132  9.999999999999999e-31  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_1673  putative anti-sigma regulatory factor, serine/threonine protein kinase  49.21 
 
 
139 aa  130  6.999999999999999e-30  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.11126 
 
 
-
 
NC_007492  Pfl01_3135  putative anti-sigma-regulatory factor (Ser/Thr protein kinase)  53.12 
 
 
134 aa  129  1.0000000000000001e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.667596 
 
 
-
 
NC_013131  Caci_2795  putative anti-sigma regulatory factor, serine/threonine protein kinase  46.77 
 
 
139 aa  127  8.000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1217  anti-sigma regulatory factor; Ser/Thr protein kinase  51.24 
 
 
141 aa  125  2.0000000000000002e-28  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_0801  putative anti-sigma regulatory factor, serine/threonine protein kinase  51.59 
 
 
134 aa  123  7e-28  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0765191  normal  0.0123921 
 
 
-
 
NC_014165  Tbis_0476  putative anti-sigma regulatory factor, serine/threonine protein kinase  48.72 
 
 
134 aa  122  1e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_2116  ATP-binding region ATPase domain protein  49.17 
 
 
137 aa  120  4e-27  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.538209 
 
 
-
 
NC_009441  Fjoh_3135  putative anti-sigma regulatory factor, serine/threonine protein kinase  49.23 
 
 
137 aa  120  5e-27  Flavobacterium johnsoniae UW101  Bacteria  normal  0.109754  n/a   
 
 
-
 
NC_010622  Bphy_0131  putative anti-sigma regulatory factor, serine/threonine protein kinase  51.97 
 
 
141 aa  117  6e-26  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3857  putative anti-sigma regulatory factor, serine/threonine protein kinase  49.21 
 
 
144 aa  115  1.9999999999999998e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.479572 
 
 
-
 
NC_009767  Rcas_0675  putative anti-sigma regulatory factor, serine/threonine protein kinase  40 
 
 
133 aa  113  8.999999999999998e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.769358  normal  0.0108346 
 
 
-
 
NC_009523  RoseRS_0162  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.2 
 
 
133 aa  112  1.0000000000000001e-24  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_3766  putative anti-sigma regulatory factor, serine/threonine protein kinase  43.41 
 
 
136 aa  112  1.0000000000000001e-24  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.069662 
 
 
-
 
NC_007644  Moth_1473  putative anti-sigma regulatory factor (serine/threonine protein kinase)  37.3 
 
 
135 aa  112  2.0000000000000002e-24  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00187817  normal 
 
 
-
 
NC_009972  Haur_2684  putative anti-sigma regulatory factor, serine/threonine protein kinase  40.32 
 
 
137 aa  106  9.000000000000001e-23  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2267  putative anti-sigma regulatory factor, serine/threonine protein kinase  46.88 
 
 
133 aa  106  9.000000000000001e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.144114 
 
 
-
 
NC_010505  Mrad2831_5231  putative anti-sigma regulatory factor, serine/threonine protein kinase  52.38 
 
 
134 aa  105  2e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.388925  normal 
 
 
-
 
NC_011757  Mchl_3341  putative anti-sigma regulatory factor, serine/threonine protein kinase  50.79 
 
 
134 aa  105  2e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.480344  normal 
 
 
-
 
NC_011757  Mchl_0510  putative anti-sigma regulatory factor, serine/threonine protein kinase  50.79 
 
 
134 aa  105  2e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0737  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.1 
 
 
133 aa  105  3e-22  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1494  putative anti-sigma regulatory factor, serine/threonine protein kinase  52.38 
 
 
134 aa  104  3e-22  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.222585  normal  0.076378 
 
 
-
 
NC_013159  Svir_32000  anti-sigma regulatory factor (Ser/Thr protein kinase)  48.39 
 
 
134 aa  103  6e-22  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.124407  normal  0.112833 
 
 
-
 
NC_013158  Huta_0197  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.62 
 
 
144 aa  101  3e-21  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0569328  n/a   
 
 
-
 
NC_008044  TM1040_0139  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.51 
 
 
140 aa  101  4e-21  Ruegeria sp. TM1040  Bacteria  normal  0.0189997  normal 
 
 
-
 
NC_011757  Mchl_3343  histidine kinase  39.84 
 
 
632 aa  100  1e-20  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0508  histidine kinase  39.02 
 
 
632 aa  97.1  7e-20  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3168  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.48 
 
 
144 aa  96.7  9e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.482123  normal 
 
 
-
 
NC_009523  RoseRS_2297  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.87 
 
 
143 aa  92.8  1e-18  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5233  histidine kinase  37.7 
 
 
638 aa  93.2  1e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3439  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.35 
 
 
136 aa  90.5  7e-18  Conexibacter woesei DSM 14684  Bacteria  normal  0.438455  normal 
 
 
-
 
NC_008009  Acid345_2412  histidine kinase  35.16 
 
 
603 aa  87.8  5e-17  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1812  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.57 
 
 
151 aa  87.4  6e-17  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3252  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.2 
 
 
139 aa  86.3  1e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4854  putative anti-sigma regulatory factor, serine/threonine protein kinase  40.38 
 
 
142 aa  85.5  2e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_5775  histidine kinase  32.33 
 
 
554 aa  74.7  0.0000000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.941039 
 
 
-
 
NC_007348  Reut_B4973  ATP-binding protein  33.05 
 
 
348 aa  73.9  0.0000000000006  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0133  histidine kinase  32.54 
 
 
482 aa  71.6  0.000000000003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1496  signal transduction histidine kinase  36.07 
 
 
1253 aa  71.6  0.000000000004  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.172842 
 
 
-
 
NC_012034  Athe_1291  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.75 
 
 
139 aa  67.4  0.00000000007  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0803  histidine kinase  31.2 
 
 
718 aa  67  0.00000000009  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0571523  hitchhiker  0.00843936 
 
 
-
 
NC_010511  M446_6564  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.5 
 
 
137 aa  65.9  0.0000000002  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.019429 
 
 
-
 
NC_007952  Bxe_B2490  histidine kinase  29.03 
 
 
554 aa  64.7  0.0000000005  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_0334  putative anti-sigma regulatory factor, serine/threonine protein kinase  40 
 
 
149 aa  63.5  0.0000000008  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3441  anti-sigma F factor  34.19 
 
 
145 aa  62.8  0.000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_07010  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.21 
 
 
143 aa  61.6  0.000000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0092  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.45 
 
 
144 aa  61.2  0.000000004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.305697  hitchhiker  0.00140915 
 
 
-
 
NC_008752  Aave_2973  anti-sigma regulatory factor, serine/threonine protein kinase and phosphatase  27.97 
 
 
358 aa  59.3  0.00000002  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.516432 
 
 
-
 
NC_010320  Teth514_2146  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.05 
 
 
139 aa  58.2  0.00000004  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0802  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.63 
 
 
335 aa  57.8  0.00000005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.132982  normal  0.0114408 
 
 
-
 
NC_010001  Cphy_3799  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.16 
 
 
140 aa  57.4  0.00000007  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000337486  n/a   
 
 
-
 
NC_013216  Dtox_0179  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.83 
 
 
142 aa  57  0.0000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5776  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.51 
 
 
330 aa  56.6  0.0000001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6565  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.54 
 
 
155 aa  55.1  0.0000003  Methylobacterium sp. 4-46  Bacteria  normal  0.849922  normal  0.0440893 
 
 
-
 
NC_013205  Aaci_1745  anti-sigma regulatory factor, serine/threonine protein kinase  29.46 
 
 
153 aa  54.7  0.0000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3136  anti-sigma-regulatory factor (Ser/Thr protein kinase and phosphatase)  28.7 
 
 
338 aa  54.3  0.0000006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.505866  normal  0.706395 
 
 
-
 
NC_010002  Daci_4408  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.57 
 
 
347 aa  54.3  0.0000006  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_0691  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.44 
 
 
142 aa  53.5  0.0000008  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1225  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.31 
 
 
148 aa  53.1  0.000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.00856956  n/a   
 
 
-
 
NC_011661  Dtur_0911  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.5 
 
 
290 aa  52.8  0.000001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5232  putative anti-sigma regulatory factor, serine/threonine protein kinase  31 
 
 
331 aa  52  0.000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.604718  normal 
 
 
-
 
NC_010483  TRQ2_1475  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.1 
 
 
321 aa  51.2  0.000005  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1429  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.1 
 
 
321 aa  51.2  0.000005  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_1674  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.23 
 
 
335 aa  51.2  0.000005  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.128227 
 
 
-
 
NC_013061  Phep_2115  Stage II sporulation E family protein  23.14 
 
 
335 aa  50.8  0.000006  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.614697 
 
 
-
 
NC_008346  Swol_0614  anti-sigma F factor  23.77 
 
 
148 aa  50.1  0.00001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_0198  putative anti-sigma regulatory factor, serine/threonine protein kinase  22.9 
 
 
356 aa  50.1  0.00001  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0791059  n/a   
 
 
-
 
NC_013216  Dtox_2065  anti-sigma regulatory factor, serine/threonine protein kinase  29.6 
 
 
146 aa  49.7  0.00001  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000202652  normal 
 
 
-
 
NC_007952  Bxe_B2489  anti-sigma regulatory factor (Ser/Thr protein kinase and phosphatase)  27.97 
 
 
330 aa  48.5  0.00003  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_31990  anti-sigma regulatory factor (Ser/Thr protein kinase)  34.4 
 
 
335 aa  47.8  0.00006  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.447378  normal  0.128313 
 
 
-
 
NC_009718  Fnod_0657  signal transduction protein  29.13 
 
 
309 aa  47.4  0.00006  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.00784458  n/a   
 
 
-
 
NC_013385  Adeg_0862  anti-sigma regulatory factor, serine/threonine protein kinase  26.98 
 
 
142 aa  47.8  0.00006  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3856  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.29 
 
 
349 aa  47.4  0.00008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.964763  normal  0.561641 
 
 
-
 
NC_009441  Fjoh_3134  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.46 
 
 
337 aa  46.6  0.0001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.602251  n/a   
 
 
-
 
NC_013595  Sros_2266  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.21 
 
 
337 aa  46.2  0.0001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.178715 
 
 
-
 
NC_011757  Mchl_3342  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.42 
 
 
333 aa  45.8  0.0002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.50307  normal 
 
 
-
 
NC_011757  Mchl_0509  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.42 
 
 
333 aa  45.8  0.0002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1558  anti-sigma F factor  28.91 
 
 
143 aa  44.7  0.0004  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0628  signal transduction protein  30.17 
 
 
307 aa  44.7  0.0005  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0132  putative anti-sigma regulatory factor, serine/threonine protein kinase  25 
 
 
382 aa  44.3  0.0005  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2413  anti-sigma regulatory factor, serine/threonine protein kinase and phosphatase  31.33 
 
 
342 aa  43.9  0.0008  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0477  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.71 
 
 
330 aa  42.7  0.001  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_4097  GAF sensor signal transduction histidine kinase  41.54 
 
 
766 aa  43.1  0.001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_006685  CNC03340  protein-histidine kinase, putative  45.07 
 
 
1390 aa  42.7  0.002  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.205996  n/a   
 
 
-
 
NC_009253  Dred_1104  anti-sigma F factor  24.14 
 
 
148 aa  42.7  0.002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.860331  n/a   
 
 
-
 
NC_013411  GYMC61_0373  anti-sigma F factor  27.27 
 
 
146 aa  42.4  0.002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007644  Moth_1497  anti-sigma F factor  26.09 
 
 
148 aa  42  0.003  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_1745  signal transduction histidine kinase, nitrogen specific, NtrB  28.57 
 
 
424 aa  41.6  0.004  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3765  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.12 
 
 
343 aa  41.2  0.004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.933404  normal  0.0854229 
 
 
-
 
NC_013440  Hoch_5872  histidine kinase  37.88 
 
 
717 aa  40.4  0.008  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.830849 
 
 
-
 
NC_012793  GWCH70_2251  anti-sigma F factor  26.27 
 
 
146 aa  40.4  0.008  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
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