Gene Haur_4854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4854 
Symbol 
ID5736700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp6186043 
End bp6186471 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content53% 
IMG OID641282020 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_001547612 
Protein GI159901365 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGTG AACCTCTGAC CCAAACGATT GCTCGTGAGG TTGATGTCTA CATCGCGGTC 
AGCCATGGAC GTGAAGTATC GCGTGGCCTA GGCTTTGATG ATGTTGATCG TACACGGATT
GAAATTGCGA TTTTAGAATT GACGCGCAAT ATTTTGGCTC ACGCCGAACG CGGTAGCATA
ACCGTGCGCG AAATTGAACG CAACGAGCAA CGTGGTATCG AAATCGAGGC AAGCGACAAT
GGACCAGGCA TCGCAGATAC AACCCTTGCC TTACGTGATG GCTATAGCAC CAAGCAGACC
CTTGGCACGG GCTTGCCTGG GGTTAAACGG TTGATGGACG AATTCGAAAT TGAATCCCAA
GTTGGTGTTG GCACGGTCGT TCGAGCACGG CGGTGGCTCC CACGTCGGCG CGAACGCGGA
GGACTATAA
 
Protein sequence
MSREPLTQTI AREVDVYIAV SHGREVSRGL GFDDVDRTRI EIAILELTRN ILAHAERGSI 
TVREIERNEQ RGIEIEASDN GPGIADTTLA LRDGYSTKQT LGTGLPGVKR LMDEFEIESQ
VGVGTVVRAR RWLPRRRERG GL