Gene Cthe_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0334 
Symbol 
ID4808483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp423853 
End bp424302 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content43% 
IMG OID640105748 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_001036765 
Protein GI125972855 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTGACG GTATAATAAG GAAAAACTTT GTTATACCTG CAAATGATTT TACATTGGCC 
GGGGAAGCAT CAAGCACCGT AAAGAAGATG CTTATACAGC TTGGTGCTGA TCCACAGAAA
ATAAAAAAGA CGGCCATATC CATGTATGAG GCTGAATTGA ACGCCGTCAT TCACGCCAAC
GGCGGAGTGG CGGAAGTTGA AATTGACAGA AACAAAGTCT TTATACGGAT AAAAGATGAA
GGACCGGGAA TACCTGATTT GGAGCTGGCA ATGCAGGAAG GATATACCAC TGCTCCGGAC
AGTATCCGTG AAATGGGGTT TGGTGCCGGA ATGGGACTTC CCAATATGAA AAGATATGCT
GACAAGCTTG AGATAATAAC GGAAGTAGGA AAGGGGACTA TTGTTGAGAT TACCGTGTTT
TTAACGGATA ATGAGAAAGA GAACCATTAA
 
Protein sequence
MSDGIIRKNF VIPANDFTLA GEASSTVKKM LIQLGADPQK IKKTAISMYE AELNAVIHAN 
GGVAEVEIDR NKVFIRIKDE GPGIPDLELA MQEGYTTAPD SIREMGFGAG MGLPNMKRYA
DKLEIITEVG KGTIVEITVF LTDNEKENH