Gene Dfer_1674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1674 
Symbol 
ID8225245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2036712 
End bp2037719 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content54% 
IMG OID644929529 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_003086081 
Protein GI255035460 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.128227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGTG CACAACAAAT TGCGTTTGAC CTGAAAGACC GCAGTTCGAT CACCCTCGTT 
AAAAAAGAAG CATCCCGGTT GGCACAAAAA ATGACCCTAT CGGCGAAGCA ACTGGCGGAA
CTCGACATTA TTATCAGTGA AATATCGACC AATCTCCTCA AACACGCCGG CGGCGGGGAA
ATTATCCTGC GGGGCATTGT GGATGGCGAC ACGCGTGCCG TGGAGGTGCT CAGCATCGAC
AGCGGCCCCG GAATGAGCGA TCCCGCACGG ATGATCGAAG ACGGGGTGTC CACCACGGGG
ACATTGGGAC AGGGATTAGG AGCTATCAAA CGGTTATCCG ACCAGTTCCA GATCTACTCG
GTGCCGGGCT GGGGCACGAT TTTGATGGTG AGAGTTTTTA AGCAAAACCC ATCAAAAGTG
AATCCTTTCA GATACGGAAT CTATCCTATT GTGCTTCCGA AACCCGGCGA GCAGTATTGC
GGCGACCTTT TCAGCTGGAA AGCCAATGCA TATTTCCTGA AAGTCATGCT GGCCGACGGC
CTCGGCCACG GTATACTGGC CCAGCAAGCC TCGGAAAAAG CGGCGGAAGC TTTTCAGAAA
AGCCTTTTCA ACACGCCGCA TCAGATCCTG ACCGACATGC ATCACCAGGT GAAAAGCACA
CGCGGACTGG TGGCCACGGT GGGCGTGTAT GACCTGACTG CGAAAACGTG GCAGTTTTGC
GGGATAGGGA ATATCTCCAC GAGGCTGCAT GACGCGATTT CGTCCAAGTC GTACCTGCCT
TATAATGGCA TCGTAGGCGT GAACATACCA CGGCACCTCG AATCGCAGAC GGTGAAATCG
GAAGCCGGCA GGCACCTGGT GCTTTGCTCC GACGGGGTCT CCTCGCGTTG GGATGCCTCC
AAGCACATCG GCGCGTTCCG GTGCGACCAG TCGATTCTCG CAGCAGTCAT TTACAAGGAT
TTCGCACGTC ATTCCGATGA TACTTCCGTA GTTGTAGTCA AAACCTAG
 
Protein sequence
MDSAQQIAFD LKDRSSITLV KKEASRLAQK MTLSAKQLAE LDIIISEIST NLLKHAGGGE 
IILRGIVDGD TRAVEVLSID SGPGMSDPAR MIEDGVSTTG TLGQGLGAIK RLSDQFQIYS
VPGWGTILMV RVFKQNPSKV NPFRYGIYPI VLPKPGEQYC GDLFSWKANA YFLKVMLADG
LGHGILAQQA SEKAAEAFQK SLFNTPHQIL TDMHHQVKST RGLVATVGVY DLTAKTWQFC
GIGNISTRLH DAISSKSYLP YNGIVGVNIP RHLESQTVKS EAGRHLVLCS DGVSSRWDAS
KHIGAFRCDQ SILAAVIYKD FARHSDDTSV VVVKT