Gene Acid345_2413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2413 
Symbol 
ID4072847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2855797 
End bp2856825 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content61% 
IMG OID637984429 
Productanti-sigma regulatory factor, serine/threonine protein kinase and phosphatase 
Protein accessionYP_591488 
Protein GI94969440 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGA GCTCCCCATA CTTCGTCCCA ATAGTTGTGC AGGAAGAAAC GCAACCTGGG 
TTGGCGCGTC GTGAAGCGGC GCGCCTGGCC GCGTTGGAAG GCATGCAGGA AAGCGACGTT
GGGCGGGCCT CCATCGTAGT GACAGAAGCG GCCAAGAACC TCGTCAAGCA TGGCCATGGC
GGAGAGATGC TGCTGCGCGG TTCGCGCTCC GCGGATAGCG CCACCCTCGA CGTGCTCGCA
CTCGATAAGG GCAAAGGCAT GCAGGATGTG GAGGCGTGCA TGCGTGACGG GTTTTCCACG
AGCGGAACTC CGGGTACCGG CATGGGCGCC ATGCAGCGCA TGTCCGATCT GTTCGAAATC
TACTCTGTCC CAGGCTCGGG GACCGTGGTG CATTGCCGCA TCGCGGCCGG CAAGAAGCCG
CAGGATTCCC GCAATTCGCG CATGGATACC GGCGTGGTGA TGGTGCCGTA CCCGGGCGAA
ACCCGGTGTG GAGATGGCTG GGCCGAACGT CATACCAATA CCCATTCCAT TTACATGATC
GTGGATGGCC TCGGTCACGG TCCCGGCGCT GCAGAAGCGG CGGACGAGGC CTTGGCTGCG
TTTGGCCGAG TGGAATCGGT AAGCGCGATC GACATTCTCG AAGAAGCGCA TTTCGCATTA
CGGAAAACCC GCGGCGCAGC CATGAGTGTT GCTTCCATCG ACCGCTACAA GCGGAAGCTG
CAGTTCGCCG GTGTAGGCAA TGTGAGCGGT TCCGTGATTA CCCCGTCGAA ATCCCAGAGC
ATGGTTTCGC ATAGCGGGAT CATTGGGCAT ACGATGGCGC GGATGCAGGA CTTCATGTAT
GAATGGCCGG CCGGGGCGAC GCTGCTGATG TTCAGTGACG GCATCTCGAC GCAGGCAAAC
CTGTTGAAGT ATCCCGGGTT GCTGTCGCGC TCTCCGTTAC TGGGAGCGGC AGTAATTTAC
CGCGACTTCA CCCGCCATCG CGATGACGCG ACGGTACTGA TCTCGCGCGA GAGAGTAGAG
AGGAACTAG
 
Protein sequence
MEMSSPYFVP IVVQEETQPG LARREAARLA ALEGMQESDV GRASIVVTEA AKNLVKHGHG 
GEMLLRGSRS ADSATLDVLA LDKGKGMQDV EACMRDGFST SGTPGTGMGA MQRMSDLFEI
YSVPGSGTVV HCRIAAGKKP QDSRNSRMDT GVVMVPYPGE TRCGDGWAER HTNTHSIYMI
VDGLGHGPGA AEAADEALAA FGRVESVSAI DILEEAHFAL RKTRGAAMSV ASIDRYKRKL
QFAGVGNVSG SVITPSKSQS MVSHSGIIGH TMARMQDFMY EWPAGATLLM FSDGISTQAN
LLKYPGLLSR SPLLGAAVIY RDFTRHRDDA TVLISRERVE RN