| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2973 |
|---|
| Symbol | |
|---|
| ID | 4669810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3262536 |
|---|
| End bp | 3263612 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639824173 |
|---|
| Product | anti-sigma regulatory factor, serine/threonine protein kinase and phosphatase |
|---|
| Protein accession | YP_971314 |
|---|
| Protein GI | 120611636 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.516432 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCGA CGCCCCATGC CTCCAGCGAG GTCCTGCACG GCTGGACCCA TGTGGCCTTC
CCGATCGACG ACGCCAGCCG CGTCGGGGAG GCGCGGCGTT TCGGCGCGCA CGCCAGCGCG
GAAATGGGCT GGAACGCCAC CGACGCCGGC CGGCTCTCGC TGGTCATTAC CGAACTGGCC
ACCAACCTGA ACCGGCACGC CCGGGGCGGC CGGCTGCTCA TCGCGGCCAT ACCCGGGCGG
CGCACGGTGG AGGCCATCGC CATCGACAAC GGCCCCGGCA TCGCCGACCT GCGGCTGGTG
ATGCGCGACG GCTACTCCAC CGGCGGATCG CCCGGCACGG GGCTGGGCGC CGTGCGGCGC
CTCGCGGATA GTTTCGATCT CCATTCCACG CCCCAGGGCA CGGTCTGTGT CGCGCGGGTG
CAGGAGCGCC CCCAGGAGGA AGAGGATGGC TTCGCGGCCG CCGGCGCCGT TCCGCGCCGC
GCCGCGCCGC TGCCGGAGGT CCGCGTCGGC GCGATCTGCC TGCCGCTGAG GGGAGAAACC
GTCTGCGGCG ACGCCTGGGC GGCCGCCATC GACGGCGAGC GCGTGGCGCT GTGCGTCGCC
GACGGGCTCG GGCACGGCCC CGAAGCGGCC CGTCCCTCGC AGGCGGCGCT GTCTGTCTTC
CTGCAGTCAC CGTTCAACGA ACTGGGCGGC ATGGCCGACC GCGCCCATCT GGCGCTGCAG
GGCACGCGCG GCGCGGCCGT GTGCAGCCTG CGCTGGGACG GCCCGGAGGC TCCCGTGCAC
AGCGCCAGCA TCGGCAACGT GTCGGCGCGC CTGCTCTCCG GCGTGGCCGA CCGGTCGGTC
CCCGCCCAGC ACGGGACCGT GGGCCTGCAC ATCCGCAAGG CGCGCGAGAC CGCCACGGAG
CCCCCGGCCC ATGCGTTGGC CGTGGTGCAT ACCGACGGTA TCGAGGCGCG CTGGAACGCC
TCCGCACTCC TTCCCCTGCT CGGCCGCGAC CCGACGCTCG CGGCCGCCGT GCTGCTGCGC
GACCACCACC GGGCCCGCGA CGATGCCACC GTCGTCGTGG TCCAGCGCAC GGGTTGA
|
|---|
| Protein sequence | MDATPHASSE VLHGWTHVAF PIDDASRVGE ARRFGAHASA EMGWNATDAG RLSLVITELA
TNLNRHARGG RLLIAAIPGR RTVEAIAIDN GPGIADLRLV MRDGYSTGGS PGTGLGAVRR
LADSFDLHST PQGTVCVARV QERPQEEEDG FAAAGAVPRR AAPLPEVRVG AICLPLRGET
VCGDAWAAAI DGERVALCVA DGLGHGPEAA RPSQAALSVF LQSPFNELGG MADRAHLALQ
GTRGAAVCSL RWDGPEAPVH SASIGNVSAR LLSGVADRSV PAQHGTVGLH IRKARETATE
PPAHALAVVH TDGIEARWNA SALLPLLGRD PTLAAAVLLR DHHRARDDAT VVVVQRTG
|
|---|
| |